387 related articles for article (PubMed ID: 35959477)
1. Skimming for barcodes: rapid production of mitochondrial genome and nuclear ribosomal repeat reference markers through shallow shotgun sequencing.
Hoban ML; Whitney J; Collins AG; Meyer C; Murphy KR; Reft AJ; Bemis KE
PeerJ; 2022; 10():e13790. PubMed ID: 35959477
[TBL] [Abstract][Full Text] [Related]
2. Biodiversity of Philippine marine fishes: A DNA barcode reference library based on voucher specimens.
Bemis KE; Girard MG; Santos MD; Carpenter KE; Deeds JR; Pitassy DE; Flores NAL; Hunter ES; Driskell AC; Macdonald KS; Weigt LA; Williams JT
Sci Data; 2023 Jun; 10(1):411. PubMed ID: 37355644
[TBL] [Abstract][Full Text] [Related]
3. Beyond DNA barcoding: The unrealized potential of genome skim data in sample identification.
Bohmann K; Mirarab S; Bafna V; Gilbert MTP
Mol Ecol; 2020 Jul; 29(14):2521-2534. PubMed ID: 32542933
[TBL] [Abstract][Full Text] [Related]
4. Filling reference gaps via assembling DNA barcodes using high-throughput sequencing-moving toward barcoding the world.
Liu S; Yang C; Zhou C; Zhou X
Gigascience; 2017 Dec; 6(12):1-8. PubMed ID: 29077841
[TBL] [Abstract][Full Text] [Related]
5. High-throughput terrestrial biodiversity assessments: mitochondrial metabarcoding, metagenomics or metatranscriptomics?
Wilson JJ; Brandon-Mong GJ; Gan HM; Sing KW
Mitochondrial DNA A DNA Mapp Seq Anal; 2019 Jan; 30(1):60-67. PubMed ID: 29591722
[TBL] [Abstract][Full Text] [Related]
6. DNA barcodes of the native ray-finned fishes in Taiwan.
Chang CH; Shao KT; Lin HY; Chiu YC; Lee MY; Liu SH; Lin PL
Mol Ecol Resour; 2017 Jul; 17(4):796-805. PubMed ID: 27717215
[TBL] [Abstract][Full Text] [Related]
7. From barcodes to genomes: extending the concept of DNA barcoding.
Coissac E; Hollingsworth PM; Lavergne S; Taberlet P
Mol Ecol; 2016 Apr; 25(7):1423-8. PubMed ID: 26821259
[TBL] [Abstract][Full Text] [Related]
8. 'Genome skimming' with the MinION hand-held sequencer identifies CITES-listed shark species in India's exports market.
Johri S; Solanki J; Cantu VA; Fellows SR; Edwards RA; Moreno I; Vyas A; Dinsdale EA
Sci Rep; 2019 Mar; 9(1):4476. PubMed ID: 30872700
[TBL] [Abstract][Full Text] [Related]
9. Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens.
Shokralla S; Gibson JF; Nikbakht H; Janzen DH; Hallwachs W; Hajibabaei M
Mol Ecol Resour; 2014 Sep; 14(5):892-901. PubMed ID: 24641208
[TBL] [Abstract][Full Text] [Related]
10. A ranking system for reference libraries of DNA barcodes: application to marine fish species from Portugal.
Costa FO; Landi M; Martins R; Costa MH; Costa ME; Carneiro M; Alves MJ; Steinke D; Carvalho GR
PLoS One; 2012; 7(4):e35858. PubMed ID: 22558244
[TBL] [Abstract][Full Text] [Related]
11. Molecular approach to the identification of fish in the South China Sea.
Zhang J; Hanner R
PLoS One; 2012; 7(2):e30621. PubMed ID: 22363454
[TBL] [Abstract][Full Text] [Related]
12. MetaZooGene Atlas and Database: Reference Sequences for Marine Ecosystems.
O'Brien TD; Blanco-Bercial L; Questel JM; Batta-Lona PG; Bucklin A
Methods Mol Biol; 2024; 2744():475-489. PubMed ID: 38683336
[TBL] [Abstract][Full Text] [Related]
13. Comparing diversity levels in environmental samples: DNA sequence capture and metabarcoding approaches using 18S and COI genes.
Giebner H; Langen K; Bourlat SJ; Kukowka S; Mayer C; Astrin JJ; Misof B; Fonseca VG
Mol Ecol Resour; 2020 Sep; 20(5):1333-1345. PubMed ID: 32462738
[TBL] [Abstract][Full Text] [Related]
14. New 12S metabarcoding primers for enhanced Neotropical freshwater fish biodiversity assessment.
Milan DT; Mendes IS; Damasceno JS; Teixeira DF; Sales NG; Carvalho DC
Sci Rep; 2020 Oct; 10(1):17966. PubMed ID: 33087755
[TBL] [Abstract][Full Text] [Related]
15. Performance comparison of genetic markers for high-throughput sequencing-based biodiversity assessment in complex communities.
Zhan A; Bailey SA; Heath DD; Macisaac HJ
Mol Ecol Resour; 2014 Sep; 14(5):1049-59. PubMed ID: 24655333
[TBL] [Abstract][Full Text] [Related]
16. A workflow for expanding DNA barcode reference libraries through 'museum harvesting' of natural history collections.
Levesque-Beaudin V; Miller ME; Dikow T; Miller SE; Prosser SWJ; Zakharov EV; McKeown JTA; Sones JE; Redmond NE; Coddington JA; Santos BF; Bird J; deWaard JR
Biodivers Data J; 2023; 11():e100677. PubMed ID: 38327333
[TBL] [Abstract][Full Text] [Related]
17. Metabarcoding of marine environmental DNA based on mitochondrial and nuclear genes.
Günther B; Knebelsberger T; Neumann H; Laakmann S; Martínez Arbizu P
Sci Rep; 2018 Oct; 8(1):14822. PubMed ID: 30287908
[TBL] [Abstract][Full Text] [Related]
18. DNA barcoding to fishes: current status and future directions.
Bhattacharya M; Sharma AR; Patra BC; Sharma G; Seo EM; Nam JS; Chakraborty C; Lee SS
Mitochondrial DNA A DNA Mapp Seq Anal; 2016 Jul; 27(4):2744-52. PubMed ID: 26057011
[TBL] [Abstract][Full Text] [Related]
19. Creating, curating and evaluating a mitogenomic reference database to improve regional species identification using environmental DNA.
Dziedzic E; Sidlauskas B; Cronn R; Anthony J; Cornwell T; Friesen TA; Konstantinidis P; Penaluna BE; Stein S; Levi T
Mol Ecol Resour; 2023 Nov; 23(8):1880-1904. PubMed ID: 37602732
[TBL] [Abstract][Full Text] [Related]
20. Assessing DNA for fish identifications from reference collections: the good, bad and ugly shed light on formalin fixation and sequencing approaches.
Appleyard SA; Maher S; Pogonoski JJ; Bent SJ; Chua XY; McGrath A
J Fish Biol; 2021 May; 98(5):1421-1432. PubMed ID: 33484178
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
