These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

133 related articles for article (PubMed ID: 35960544)

  • 1. Comparison of Cosine, Modified Cosine, and Neutral Loss Based Spectrum Alignment For Discovery of Structurally Related Molecules.
    Bittremieux W; Schmid R; Huber F; van der Hooft JJJ; Wang M; Dorrestein PC
    J Am Soc Mass Spectrom; 2022 Sep; 33(9):1733-1744. PubMed ID: 35960544
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Spec2Vec: Improved mass spectral similarity scoring through learning of structural relationships.
    Huber F; Ridder L; Verhoeven S; Spaaks JH; Diblen F; Rogers S; van der Hooft JJJ
    PLoS Comput Biol; 2021 Feb; 17(2):e1008724. PubMed ID: 33591968
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Retrieving and Utilizing Hypothetical Neutral Losses from Tandem Mass Spectra for Spectral Similarity Analysis and Unknown Metabolite Annotation.
    Xing S; Hu Y; Yin Z; Liu M; Tang X; Fang M; Huan T
    Anal Chem; 2020 Nov; 92(21):14476-14483. PubMed ID: 33076659
    [TBL] [Abstract][Full Text] [Related]  

  • 4. BLINK enables ultrafast tandem mass spectrometry cosine similarity scoring.
    Harwood TV; Treen DGC; Wang M; de Jong W; Northen TR; Bowen BP
    Sci Rep; 2023 Aug; 13(1):13462. PubMed ID: 37596301
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Comparative analysis of mass spectral similarity measures on peak alignment for comprehensive two-dimensional gas chromatography mass spectrometry.
    Kim S; Zhang X
    Comput Math Methods Med; 2013; 2013():509761. PubMed ID: 24151524
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Spectral entropy outperforms MS/MS dot product similarity for small-molecule compound identification.
    Li Y; Kind T; Folz J; Vaniya A; Mehta SS; Fiehn O
    Nat Methods; 2021 Dec; 18(12):1524-1531. PubMed ID: 34857935
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy.
    Quinn RA; Nothias LF; Vining O; Meehan M; Esquenazi E; Dorrestein PC
    Trends Pharmacol Sci; 2017 Feb; 38(2):143-154. PubMed ID: 27842887
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SIMILE enables alignment of tandem mass spectra with statistical significance.
    Treen DGC; Wang M; Xing S; Louie KB; Huan T; Dorrestein PC; Northen TR; Bowen BP
    Nat Commun; 2022 May; 13(1):2510. PubMed ID: 35523965
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Weighting Low-Intensity MS/MS Ions and
    Engler Hart C; Kind T; Dorrestein PC; Healey D; Domingo-Fernández D
    J Am Soc Mass Spectrom; 2024 Feb; 35(2):266-274. PubMed ID: 38271611
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Data Processing for GC-MS- and LC-MS-Based Untargeted Metabolomics.
    Yao L; Sheflin AM; Broeckling CD; Prenni JE
    Methods Mol Biol; 2019; 1978():287-299. PubMed ID: 31119670
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparative Analysis of Binary Similarity Measures for Compound Identification in MassSpectrometry-Based Metabolomics.
    Kim S; Kato I; Zhang X
    Metabolites; 2022 Jul; 12(8):. PubMed ID: 35893261
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Untargeted and Targeted Circadian Metabolomics Using Liquid Chromatography-Tandem Mass Spectrometry (LC-MS/MS) and Flow Injection-Electrospray Ionization-Tandem Mass Spectrometry (FIA-ESI-MS/MS).
    Artati A; Prehn C; Lutter D; Dyar KA
    Methods Mol Biol; 2022; 2482():311-327. PubMed ID: 35610436
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Fast screening and identification of illegal adulteration in dietary supplements and herbal medicines using molecular networking with deep-learning-based similarity algorithms.
    Sheng Y; Xue Y; Wang J; Liu S; Jiang Y
    Anal Bioanal Chem; 2023 Jul; 415(16):3285-3293. PubMed ID: 37119358
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Clustering of MS
    Depke T; Franke R; Brönstrup M
    J Chromatogr B Analyt Technol Biomed Life Sci; 2017 Dec; 1071():19-28. PubMed ID: 28642031
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MS2CNN: predicting MS/MS spectrum based on protein sequence using deep convolutional neural networks.
    Lin YM; Chen CT; Chang JM
    BMC Genomics; 2019 Dec; 20(Suppl 9):906. PubMed ID: 31874640
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Comparison of peak-picking workflows for untargeted liquid chromatography/high-resolution mass spectrometry metabolomics data analysis.
    Rafiei A; Sleno L
    Rapid Commun Mass Spectrom; 2015 Jan; 29(1):119-27. PubMed ID: 25462372
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Pseudotargeted metabolomics method and its application in serum biomarker discovery for hepatocellular carcinoma based on ultra high-performance liquid chromatography/triple quadrupole mass spectrometry.
    Chen S; Kong H; Lu X; Li Y; Yin P; Zeng Z; Xu G
    Anal Chem; 2013 Sep; 85(17):8326-33. PubMed ID: 23889541
    [TBL] [Abstract][Full Text] [Related]  

  • 18. LC-MS untargeted metabolomics assesses the delayed response of glufosinate treatment of transgenic glufosinate resistant (GR) buffalo grasses (Stenotaphrum secundatum L.).
    Boonchaisri S; Rochfort S; Stevenson T; Dias DA
    Metabolomics; 2021 Feb; 17(3):28. PubMed ID: 33609206
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Autonomous METLIN-Guided In-source Fragment Annotation for Untargeted Metabolomics.
    Domingo-Almenara X; Montenegro-Burke JR; Guijas C; Majumder EL; Benton HP; Siuzdak G
    Anal Chem; 2019 Mar; 91(5):3246-3253. PubMed ID: 30681830
    [TBL] [Abstract][Full Text] [Related]  

  • 20. ModiFinder: Tandem Mass Spectral Alignment Enables Structural Modification Site Localization.
    Shahneh MRZ; Strobel M; Vitale GA; Geibel C; Abiead YE; Garg N; Wagner B; Forchhammer K; Aron A; Phelan VV; Petras D; Wang M
    J Am Soc Mass Spectrom; 2024 Jun; ():. PubMed ID: 38830143
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.