These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

148 related articles for article (PubMed ID: 35965322)

  • 21. Predicting statistical properties of open reading frames in bacterial genomes.
    Mir K; Neuhaus K; Scherer S; Bossert M; Schober S
    PLoS One; 2012; 7(9):e45103. PubMed ID: 23028785
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Translation of small downstream ORFs enhances translation of canonical main open reading frames.
    Wu Q; Wright M; Gogol MM; Bradford WD; Zhang N; Bazzini AA
    EMBO J; 2020 Sep; 39(17):e104763. PubMed ID: 32744758
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Filtering "genic" open reading frames from genomic DNA samples for advanced annotation.
    D'Angelo S; Velappan N; Mignone F; Santoro C; Sblattero D; Kiss C; Bradbury AR
    BMC Genomics; 2011 Jun; 12 Suppl 1(Suppl 1):S5. PubMed ID: 21810207
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Alternative ORFs and small ORFs: shedding light on the dark proteome.
    Orr MW; Mao Y; Storz G; Qian SB
    Nucleic Acids Res; 2020 Feb; 48(3):1029-1042. PubMed ID: 31504789
    [TBL] [Abstract][Full Text] [Related]  

  • 25. OpenCustomDB: Integration of Unannotated Open Reading Frames and Genetic Variants to Generate More Comprehensive Customized Protein Databases.
    Guilloy N; Brunet MA; Leblanc S; Jacques JF; Hardy MP; Ehx G; Lanoix J; Thibault P; Perreault C; Roucou X
    J Proteome Res; 2023 May; 22(5):1492-1500. PubMed ID: 36961377
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Common and phylogenetically widespread coding for peptides by bacterial small RNAs.
    Friedman RC; Kalkhof S; Doppelt-Azeroual O; Mueller SA; Chovancová M; von Bergen M; Schwikowski B
    BMC Genomics; 2017 Jul; 18(1):553. PubMed ID: 28732463
    [TBL] [Abstract][Full Text] [Related]  

  • 27. A workflow to identify novel proteins based on the direct mapping of peptide-spectrum-matches to genomic locations.
    Anders J; Petruschke H; Jehmlich N; Haange SB; von Bergen M; Stadler PF
    BMC Bioinformatics; 2021 May; 22(1):277. PubMed ID: 34039272
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Developmental regulation of canonical and small ORF translation from mRNAs.
    Patraquim P; Mumtaz MAS; Pueyo JI; Aspden JL; Couso JP
    Genome Biol; 2020 May; 21(1):128. PubMed ID: 32471506
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Analysis of nested alternate open reading frames and their encoded proteins.
    Vasu K; Khan D; Ramachandiran I; Blankenberg D; Fox PL
    NAR Genom Bioinform; 2022 Dec; 4(4):lqac076. PubMed ID: 36267124
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Ac-LysargiNase efficiently helps genome reannotation of Mycolicibacterium smegmatis MC
    Zhu H; Jiang S; Zhou W; Chi H; Sun J; Shi J; Zhang Z; Chang L; Yu L; Zhang L; Lyu Z; Xu P; Zhang Y
    J Proteomics; 2022 Jul; 264():104622. PubMed ID: 35598869
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Large-scale, multi-genome analysis of alternate open reading frames in bacteria and archaea.
    Veloso F; Riadi G; Aliaga D; Lieph R; Holmes DS
    OMICS; 2005; 9(1):91-105. PubMed ID: 15805780
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Translation of non-canonical open reading frames as a cancer cell survival mechanism in childhood medulloblastoma.
    Hofman DA; Ruiz-Orera J; Yannuzzi I; Murugesan R; Brown A; Clauser KR; Condurat AL; van Dinter JT; Engels SAG; Goodale A; van der Lugt J; Abid T; Wang L; Zhou KN; Vogelzang J; Ligon KL; Phoenix TN; Roth JA; Root DE; Hubner N; Golub TR; Bandopadhayay P; van Heesch S; Prensner JR
    bioRxiv; 2023 May; ():. PubMed ID: 37205492
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Understanding small ORF diversity through a comprehensive transcription feature classification.
    Guerra-Almeida D; Tschoeke DA; Nunes-da-Fonseca R
    DNA Res; 2021 Sep; 28(5):. PubMed ID: 34240112
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The Protein Coded by a Short Open Reading Frame, Not by the Annotated Coding Sequence, Is the Main Gene Product of the Dual-Coding Gene
    Delcourt V; Brunelle M; Roy AV; Jacques JF; Salzet M; Fournier I; Roucou X
    Mol Cell Proteomics; 2018 Dec; 17(12):2402-2411. PubMed ID: 30181344
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Reverse genetic analysis of yeast YPR099C/MRPL51 reveals a critical role of both overlapping ORFs in respiratory growth and MRPL51 in mitochondrial DNA maintenance.
    Sahu PK; Salim S; Pp M; Chauhan S; Tomar RS
    FEMS Yeast Res; 2019 Sep; 19(6):. PubMed ID: 31374566
    [TBL] [Abstract][Full Text] [Related]  

  • 36. REPARATION: ribosome profiling assisted (re-)annotation of bacterial genomes.
    Ndah E; Jonckheere V; Giess A; Valen E; Menschaert G; Van Damme P
    Nucleic Acids Res; 2017 Nov; 45(20):e168. PubMed ID: 28977509
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Upstream open reading frames may contain hundreds of novel human exons.
    Ji HJ; Salzberg SL
    bioRxiv; 2024 Apr; ():. PubMed ID: 38562894
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome.
    Tcherepanov V; Ehlers A; Upton C
    BMC Genomics; 2006 Jun; 7():150. PubMed ID: 16772042
    [TBL] [Abstract][Full Text] [Related]  

  • 39. A platform for curated products from novel open reading frames prompts reinterpretation of disease variants.
    Neville MDC; Kohze R; Erady C; Meena N; Hayden M; Cooper DN; Mort M; Prabakaran S
    Genome Res; 2021 Feb; 31(2):327-336. PubMed ID: 33468550
    [TBL] [Abstract][Full Text] [Related]  

  • 40. ORF organization and gene recognition in the yeast genome.
    Luo L; Li H; Zhang L
    Comp Funct Genomics; 2003; 4(3):318-28. PubMed ID: 18629282
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.