These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

314 related articles for article (PubMed ID: 35981533)

  • 1. Extent to which array genotyping and imputation with large reference panels approximate deep whole-genome sequencing.
    Hanks SC; Forer L; Schönherr S; LeFaive J; Martins T; Welch R; Gagliano Taliun SA; Braff D; Johnsen JM; Kenny EE; Konkle BA; Laakso M; Loos RFJ; McCarroll S; Pato C; Pato MT; Smith AV; ; Boehnke M; Scott LJ; Fuchsberger C
    Am J Hum Genet; 2022 Sep; 109(9):1653-1666. PubMed ID: 35981533
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations.
    Kowalski MH; Qian H; Hou Z; Rosen JD; Tapia AL; Shan Y; Jain D; Argos M; Arnett DK; Avery C; Barnes KC; Becker LC; Bien SA; Bis JC; Blangero J; Boerwinkle E; Bowden DW; Buyske S; Cai J; Cho MH; Choi SH; Choquet H; Cupples LA; Cushman M; Daya M; de Vries PS; Ellinor PT; Faraday N; Fornage M; Gabriel S; Ganesh SK; Graff M; Gupta N; He J; Heckbert SR; Hidalgo B; Hodonsky CJ; Irvin MR; Johnson AD; Jorgenson E; Kaplan R; Kardia SLR; Kelly TN; Kooperberg C; Lasky-Su JA; Loos RJF; Lubitz SA; Mathias RA; McHugh CP; Montgomery C; Moon JY; Morrison AC; Palmer ND; Pankratz N; Papanicolaou GJ; Peralta JM; Peyser PA; Rich SS; Rotter JI; Silverman EK; Smith JA; Smith NL; Taylor KD; Thornton TA; Tiwari HK; Tracy RP; Wang T; Weiss ST; Weng LC; Wiggins KL; Wilson JG; Yanek LR; Zöllner S; North KE; Auer PL; ; ; Raffield LM; Reiner AP; Li Y
    PLoS Genet; 2019 Dec; 15(12):e1008500. PubMed ID: 31869403
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Genotype imputation performance of three reference panels using African ancestry individuals.
    Vergara C; Parker MM; Franco L; Cho MH; Valencia-Duarte AV; Beaty TH; Duggal P
    Hum Genet; 2018 Apr; 137(4):281-292. PubMed ID: 29637265
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Sequencing and imputation in GWAS: Cost-effective strategies to increase power and genomic coverage across diverse populations.
    Quick C; Anugu P; Musani S; Weiss ST; Burchard EG; White MJ; Keys KL; Cucca F; Sidore C; Boehnke M; Fuchsberger C
    Genet Epidemiol; 2020 Sep; 44(6):537-549. PubMed ID: 32519380
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The power of TOPMed imputation for the discovery of Latino-enriched rare variants associated with type 2 diabetes.
    Huerta-Chagoya A; Schroeder P; Mandla R; Deutsch AJ; Zhu W; Petty L; Yi X; Cole JB; Udler MS; Dornbos P; Porneala B; DiCorpo D; Liu CT; Li JH; Szczerbiński L; Kaur V; Kim J; Lu Y; Martin A; Eizirik DL; Marchetti P; Marselli L; Chen L; Srinivasan S; Todd J; Flannick J; Gubitosi-Klug R; Levitsky L; Shah R; Kelsey M; Burke B; Dabelea DM; Divers J; Marcovina S; Stalbow L; Loos RJF; Darst BF; Kooperberg C; Raffield LM; Haiman C; Sun Q; McCormick JB; Fisher-Hoch SP; Ordoñez ML; Meigs J; Baier LJ; González-Villalpando C; González-Villalpando ME; Orozco L; García-García L; Moreno-Estrada A; ; Aguilar-Salinas CA; Tusié T; Dupuis J; Ng MCY; Manning A; Highland HM; Cnop M; Hanson R; Below J; Florez JC; Leong A; Mercader JM
    Diabetologia; 2023 Jul; 66(7):1273-1288. PubMed ID: 37148359
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Rare variant genotype imputation with thousands of study-specific whole-genome sequences: implications for cost-effective study designs.
    Pistis G; Porcu E; Vrieze SI; Sidore C; Steri M; Danjou F; Busonero F; Mulas A; Zoledziewska M; Maschio A; Brennan C; Lai S; Miller MB; Marcelli M; Urru MF; Pitzalis M; Lyons RH; Kang HM; Jones CM; Angius A; Iacono WG; Schlessinger D; McGue M; Cucca F; Abecasis GR; Sanna S
    Eur J Hum Genet; 2015 Jul; 23(7):975-83. PubMed ID: 25293720
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Improving imputation quality in Samoans through the integration of population-specific sequences into existing reference panels.
    Carlson JC; Krishnan M; Liu S; Anderson KJ; Zhang JZ; Yapp TJ; Chiyka EA; Dikec DA; Cheng H; Naseri T; Reupena MS; Viali S; Deka R; Hawley NL; McGarvey ST; Weeks DE; Minster RL
    medRxiv; 2023 Oct; ():. PubMed ID: 37961708
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Analyzing the Korean reference genome with meta-imputation increased the imputation accuracy and spectrum of rare variants in the Korean population.
    Hwang MY; Choi NH; Won HH; Kim BJ; Kim YJ
    Front Genet; 2022; 13():1008646. PubMed ID: 36506321
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improving power of association tests using multiple sets of imputed genotypes from distributed reference panels.
    Zhou W; Fritsche LG; Das S; Zhang H; Nielsen JB; Holmen OL; Chen J; Lin M; Elvestad MB; Hveem K; Abecasis GR; Kang HM; Willer CJ
    Genet Epidemiol; 2017 Dec; 41(8):744-755. PubMed ID: 28861891
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Accurate Imputation of Untyped Variants from Deep Sequencing Data.
    Torkamaneh D; Belzile F
    Methods Mol Biol; 2021; 2243():271-281. PubMed ID: 33606262
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A new strategy for enhancing imputation quality of rare variants from next-generation sequencing data via combining SNP and exome chip data.
    Kim YJ; Lee J; Kim BJ; ; Park T
    BMC Genomics; 2015 Dec; 16():1109. PubMed ID: 26715385
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Imputation accuracy across global human populations.
    Cahoon JL; Rui X; Tang E; Simons C; Langie J; Chen M; Lo YC; Chiang CWK
    Am J Hum Genet; 2024 May; 111(5):979-989. PubMed ID: 38604166
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Imputation-based assessment of next generation rare exome variant arrays.
    Martin AR; Tse G; Bustamante CD; Kenny EE
    Pac Symp Biocomput; 2014; ():241-52. PubMed ID: 24297551
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Rare Variants Imputation in Admixed Populations: Comparison Across Reference Panels and Bioinformatics Tools.
    Sariya S; Lee JH; Mayeux R; Vardarajan BN; Reyes-Dumeyer D; Manly JJ; Brickman AM; Lantigua R; Medrano M; Jimenez-Velazquez IZ; Tosto G
    Front Genet; 2019; 10():239. PubMed ID: 31001313
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Effect of genome-wide genotyping and reference panels on rare variants imputation.
    Zheng HF; Ladouceur M; Greenwood CM; Richards JB
    J Genet Genomics; 2012 Oct; 39(10):545-50. PubMed ID: 23089364
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Whole-genome characterization in pedigreed non-human primates using genotyping-by-sequencing (GBS) and imputation.
    Bimber BN; Raboin MJ; Letaw J; Nevonen KA; Spindel JE; McCouch SR; Cervera-Juanes R; Spindel E; Carbone L; Ferguson B; Vinson A
    BMC Genomics; 2016 Aug; 17(1):676. PubMed ID: 27558348
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Performance of genotype imputation for low frequency and rare variants from the 1000 genomes.
    Zheng HF; Rong JJ; Liu M; Han F; Zhang XW; Richards JB; Wang L
    PLoS One; 2015; 10(1):e0116487. PubMed ID: 25621886
    [TBL] [Abstract][Full Text] [Related]  

  • 18. MagicalRsq: Machine-learning-based genotype imputation quality calibration.
    Sun Q; Yang Y; Rosen JD; Jiang MZ; Chen J; Liu W; Wen J; Raffield LM; Pace RG; Zhou YH; Wright FA; Blackman SM; Bamshad MJ; Gibson RL; Cutting GR; Knowles MR; Schrider DR; Fuchsberger C; Li Y
    Am J Hum Genet; 2022 Nov; 109(11):1986-1997. PubMed ID: 36198314
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Comprehensive evaluation of imputation performance in African Americans.
    Chanda P; Yuhki N; Li M; Bader JS; Hartz A; Boerwinkle E; Kao WH; Arking DE
    J Hum Genet; 2012 Jul; 57(7):411-21. PubMed ID: 22648186
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Comparison of genotype imputation strategies using a combined reference panel for chicken population.
    Ye S; Yuan X; Huang S; Zhang H; Chen Z; Li J; Zhang X; Zhang Z
    Animal; 2019 Jun; 13(6):1119-1126. PubMed ID: 30370890
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.