132 related articles for article (PubMed ID: 36035127)
1. Rapid and simple analysis of short and long sequencing reads using Duesselpore
Vogeley C; Nguyen T; Woeste S; Krutmann J; Haarmann-Stemmann T; Rossi A
Front Genet; 2022; 13():931996. PubMed ID: 36035127
[TBL] [Abstract][Full Text] [Related]
2. Identification of genome edited cells using CRISPRnano.
Nguyen T; Ramachandran H; Martins S; Krutmann J; Rossi A
Nucleic Acids Res; 2022 Jul; 50(W1):W199-W203. PubMed ID: 35640601
[TBL] [Abstract][Full Text] [Related]
3. Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies.
Ammer-Herrmenau C; Pfisterer N; van den Berg T; Gavrilova I; Amanzada A; Singh SK; Khalil A; Alili R; Belda E; Clement K; Abd El Wahed A; Gady EE; Haubrock M; Beißbarth T; Ellenrieder V; Neesse A
mSystems; 2021 Aug; 6(4):e0075021. PubMed ID: 34427527
[TBL] [Abstract][Full Text] [Related]
4. Accurate profiling of forensic autosomal STRs using the Oxford Nanopore Technologies MinION device.
Hall CL; Kesharwani RK; Phillips NR; Planz JV; Sedlazeck FJ; Zascavage RR
Forensic Sci Int Genet; 2022 Jan; 56():102629. PubMed ID: 34837788
[TBL] [Abstract][Full Text] [Related]
5. Targeted RNA-Based Oxford Nanopore Sequencing for Typing 12 Classical HLA Genes.
Johansson T; Koskela S; Yohannes DA; Partanen J; Saavalainen P
Front Genet; 2021; 12():635601. PubMed ID: 33763116
[TBL] [Abstract][Full Text] [Related]
6. Analysis and comprehensive comparison of PacBio and nanopore-based RNA sequencing of the
Cui J; Shen N; Lu Z; Xu G; Wang Y; Jin B
Plant Methods; 2020; 16():85. PubMed ID: 32536962
[TBL] [Abstract][Full Text] [Related]
7. Comprehensive comparison of Pacific Biosciences and Oxford Nanopore Technologies and their applications to transcriptome analysis.
Weirather JL; de Cesare M; Wang Y; Piazza P; Sebastiano V; Wang XJ; Buck D; Au KF
F1000Res; 2017; 6():100. PubMed ID: 28868132
[No Abstract] [Full Text] [Related]
8. SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.
Johnson BK; Scholz MB; Teal TK; Abramovitch RB
BMC Bioinformatics; 2016 Feb; 17():66. PubMed ID: 26847232
[TBL] [Abstract][Full Text] [Related]
9. Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS).
Deshpande SV; Reed TM; Sullivan RF; Kerkhof LJ; Beigel KM; Wade MM
Genes (Basel); 2019 Jul; 10(8):. PubMed ID: 31366182
[TBL] [Abstract][Full Text] [Related]
10. Oxford Nanopore MinION Direct RNA-Seq for Systems Biology.
Pyatnitskiy MA; Arzumanian VA; Radko SP; Ptitsyn KG; Vakhrushev IV; Poverennaya EV; Ponomarenko EA
Biology (Basel); 2021 Nov; 10(11):. PubMed ID: 34827124
[TBL] [Abstract][Full Text] [Related]
11. Comparison of ONT and CCS sequencing technologies on the polyploid genome of a medicinal plant showed that high error rate of ONT reads are not suitable for self-correction.
Zeng P; Tian Z; Han Y; Zhang W; Zhou T; Peng Y; Hu H; Cai J
Chin Med; 2022 Aug; 17(1):94. PubMed ID: 35945546
[TBL] [Abstract][Full Text] [Related]
12. WeFaceNano: a user-friendly pipeline for complete ONT sequence assembly and detection of antibiotic resistance in multi-plasmid bacterial isolates.
Heikema AP; Jansen R; Hiltemann SD; Hays JP; Stubbs AP
BMC Microbiol; 2021 Jun; 21(1):171. PubMed ID: 34098864
[TBL] [Abstract][Full Text] [Related]
13. Evaluation of Oxford Nanopore MinION RNA-Seq Performance for Human Primary Cells.
Massaiu I; Songia P; Chiesa M; Valerio V; Moschetta D; Alfieri V; Myasoedova VA; Schmid M; Cassetta L; Colombo GI; D'Alessandra Y; Poggio P
Int J Mol Sci; 2021 Jun; 22(12):. PubMed ID: 34204756
[TBL] [Abstract][Full Text] [Related]
14. Computational methods for 16S metabarcoding studies using Nanopore sequencing data.
Santos A; van Aerle R; Barrientos L; Martinez-Urtaza J
Comput Struct Biotechnol J; 2020; 18():296-305. PubMed ID: 32071706
[TBL] [Abstract][Full Text] [Related]
15. Evaluation of tools for long read RNA-seq splice-aware alignment.
Križanovic K; Echchiki A; Roux J; Šikic M
Bioinformatics; 2018 Mar; 34(5):748-754. PubMed ID: 29069314
[TBL] [Abstract][Full Text] [Related]
16. Oxford Nanopore and Bionano Genomics technologies evaluation for plant structural variation detection.
Canaguier A; Guilbaud R; Denis E; Magdelenat G; Belser C; Istace B; Cruaud C; Wincker P; Le Paslier MC; Faivre-Rampant P; Barbe V
BMC Genomics; 2022 Apr; 23(1):317. PubMed ID: 35448948
[TBL] [Abstract][Full Text] [Related]
17. Comparison of Illumina versus Nanopore 16S rRNA Gene Sequencing of the Human Nasal Microbiota.
Heikema AP; Horst-Kreft D; Boers SA; Jansen R; Hiltemann SD; de Koning W; Kraaij R; de Ridder MAJ; van Houten CB; Bont LJ; Stubbs AP; Hays JP
Genes (Basel); 2020 Sep; 11(9):. PubMed ID: 32967250
[TBL] [Abstract][Full Text] [Related]
18. Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules.
Sessegolo C; Cruaud C; Da Silva C; Cologne A; Dubarry M; Derrien T; Lacroix V; Aury JM
Sci Rep; 2019 Oct; 9(1):14908. PubMed ID: 31624302
[TBL] [Abstract][Full Text] [Related]
19. Assessing the performance of the Oxford Nanopore Technologies MinION.
Laver T; Harrison J; O'Neill PA; Moore K; Farbos A; Paszkiewicz K; Studholme DJ
Biomol Detect Quantif; 2015 Mar; 3():1-8. PubMed ID: 26753127
[TBL] [Abstract][Full Text] [Related]
20. A long road/read to rapid high-resolution HLA typing: The nanopore perspective.
Liu C
Hum Immunol; 2021 Jul; 82(7):488-495. PubMed ID: 32386782
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]