BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

181 related articles for article (PubMed ID: 36035873)

  • 1. Inference on spatial heterogeneity in tumor microenvironment using spatial transcriptomics data.
    Biswas A; Ghaddar B; Riedlinger G; De S
    Comput Syst Oncol; 2022 Sep; 2(3):. PubMed ID: 36035873
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study.
    Fatemi M; Feng E; Sharma C; Azher Z; Goel T; Ramwala O; Palisoul SM; Barney RE; Perreard L; Kolling FW; Salas LA; Christensen BC; Tsongalis GJ; Vaickus LJ; Levy JJ
    J Pathol Inform; 2023; 14():100308. PubMed ID: 37114077
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Single-cell transcriptome analysis of tumor and stromal compartments of pancreatic ductal adenocarcinoma primary tumors and metastatic lesions.
    Lin W; Noel P; Borazanci EH; Lee J; Amini A; Han IW; Heo JS; Jameson GS; Fraser C; Steinbach M; Woo Y; Fong Y; Cridebring D; Von Hoff DD; Park JO; Han H
    Genome Med; 2020 Sep; 12(1):80. PubMed ID: 32988401
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Integrating microarray-based spatial transcriptomics and single-cell RNA-sequencing reveals tissue architecture in esophageal squamous cell carcinoma.
    Guo W; Zhou B; Yang Z; Liu X; Huai Q; Guo L; Xue X; Tan F; Li Y; Xue Q; Gao S; He J
    EBioMedicine; 2022 Oct; 84():104281. PubMed ID: 36162205
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Pointwise mutual information quantifies intratumor heterogeneity in tissue sections labeled with multiple fluorescent biomarkers.
    Spagnolo DM; Gyanchandani R; Al-Kofahi Y; Stern AM; Lezon TR; Gough A; Meyer DE; Ginty F; Sarachan B; Fine J; Lee AV; Taylor DL; Chennubhotla SC
    J Pathol Inform; 2016; 7():47. PubMed ID: 27994939
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Spatial Transcriptomics Depict Ligand-Receptor Cross-talk Heterogeneity at the Tumor-Stroma Interface in Long-Term Ovarian Cancer Survivors.
    Ferri-Borgogno S; Zhu Y; Sheng J; Burks JK; Gomez JA; Wong KK; Wong STC; Mok SC
    Cancer Res; 2023 May; 83(9):1503-1516. PubMed ID: 36787106
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Spatial analysis of stromal signatures identifies invasive front carcinoma-associated fibroblasts as suppressors of anti-tumor immune response in esophageal cancer.
    He JZ; Chen Y; Zeng FM; Huang QF; Zhang HF; Wang SH; Yu SX; Pang XX; Liu Y; Xu XE; Wu JY; Shen WJ; Li ZY; Li EM; Xu LY
    J Exp Clin Cancer Res; 2023 May; 42(1):136. PubMed ID: 37254126
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Spatial transcriptomics atlas reveals the crosstalk between cancer-associated fibroblasts and tumor microenvironment components in colorectal cancer.
    Peng Z; Ye M; Ding H; Feng Z; Hu K
    J Transl Med; 2022 Jul; 20(1):302. PubMed ID: 35794563
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Computational solutions for spatial transcriptomics.
    Kleino I; Frolovaitė P; Suomi T; Elo LL
    Comput Struct Biotechnol J; 2022; 20():4870-4884. PubMed ID: 36147664
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Metastatic phenotype and immunosuppressive tumour microenvironment in pancreatic ductal adenocarcinoma: Key role of the urokinase plasminogen activator (PLAU).
    Hosen SMZ; Uddin MN; Xu Z; Buckley BJ; Perera C; Pang TCY; Mekapogu AR; Moni MA; Notta F; Gallinger S; Pirola R; Wilson J; Ranson M; Goldstein D; Apte M
    Front Immunol; 2022; 13():1060957. PubMed ID: 36591282
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Location, location, location: mapping the lymphoma tumor microenvironment using spatial transcriptomics.
    Pickard K; Stephenson E; Mitchell A; Jardine L; Bacon CM
    Front Oncol; 2023; 13():1258245. PubMed ID: 37869076
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Spatial profiling of the microenvironment reveals low intratumoral heterogeneity and STK11-associated immune evasion in therapy-naïve lung adenocarcinomas.
    Goldschmid H; Kluck K; Ball M; Kirchner M; Allgäuer M; Winter H; Herth F; Heußel CP; Pullamsetti SS; Savai R; Yong TTK; Schirmacher P; Peters S; Thomas M; Christopoulos P; Budczies J; Stenzinger A; Kazdal D
    Lung Cancer; 2023 Jun; 180():107212. PubMed ID: 37141769
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Single-cell transcriptomics reveals long noncoding RNAs associated with tumor biology and the microenvironment in pancreatic cancer.
    Dang HX; Saha D; Jayasinghe R; Zhao S; Coonrod E; Mudd J; Goedegebuure SP; Fields R; Ding L; Maher CA
    NAR Cancer; 2023 Dec; 5(4):zcad055. PubMed ID: 38023733
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Spatial transcriptomics reveals the heterogeneity and FGG+CRP+ inflammatory cancer-associated fibroblasts replace islets in pancreatic ductal adenocarcinoma.
    Ren Z; Pan B; Wang F; Lyu S; Zhai J; Hu X; Liu Z; Li L; Lang R; He Q; Zhao X
    Front Oncol; 2023; 13():1112576. PubMed ID: 37124494
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The Web-Based Portal SpatialTME Integrates Histological Images with Single-Cell and Spatial Transcriptomics to Explore the Tumor Microenvironment.
    Shi J; Wei X; Xun Z; Ding X; Liu Y; Liu L; Ye Y
    Cancer Res; 2024 Apr; 84(8):1210-1220. PubMed ID: 38315776
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Multiregional single-cell proteogenomic analysis of ccRCC reveals cytokine drivers of intratumor spatial heterogeneity.
    Miheecheva N; Postovalova E; Lyu Y; Ramachandran A; Bagaev A; Svekolkin V; Galkin I; Zyrin V; Maximov V; Lozinsky Y; Isaev S; Ovcharov P; Shamsutdinova D; Cheng EH; Nomie K; Brown JH; Tsiper M; Ataullakhanov R; Fowler N; Hsieh JJ
    Cell Rep; 2022 Aug; 40(7):111180. PubMed ID: 35977503
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Single-Cell Analysis Reveals Spatial Heterogeneity of Immune Cells in Lung Adenocarcinoma.
    Wang Y; Li X; Peng S; Hu H; Wang Y; Shao M; Feng G; Liu Y; Bai Y
    Front Cell Dev Biol; 2021; 9():638374. PubMed ID: 34513820
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Multiphasic Heterogeneity of Fibroblasts in the Microenvironment of Pancreatic Ductal Adenocarcinoma: Dissection and the Sum of the Dynamics.
    Ijichi H
    Cancers (Basel); 2022 Oct; 14(19):. PubMed ID: 36230803
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Spatially Resolved Transcriptomics Enables Dissection of Genetic Heterogeneity in Stage III Cutaneous Malignant Melanoma.
    Thrane K; Eriksson H; Maaskola J; Hansson J; Lundeberg J
    Cancer Res; 2018 Oct; 78(20):5970-5979. PubMed ID: 30154148
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Spatially resolved tissue imaging to analyze the tumor immune microenvironment: beyond cell-type densities.
    Lopez Janeiro A; Miraval Wong E; Jiménez-Sánchez D; Ortiz de Solorzano C; Lozano MD; Teijeira A; Schalper KA; Melero I; De Andrea CE
    J Immunother Cancer; 2024 May; 12(5):. PubMed ID: 38821717
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.