These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

211 related articles for article (PubMed ID: 36116007)

  • 1. Brownian dynamics simulations of mesoscale chromatin fibers.
    Li Z; Portillo-Ledesma S; Schlick T
    Biophys J; 2023 Jul; 122(14):2884-2897. PubMed ID: 36116007
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Chromatosome Structure and Dynamics from Molecular Simulations.
    Öztürk MA; De M; Cojocaru V; Wade RC
    Annu Rev Phys Chem; 2020 Apr; 71():101-119. PubMed ID: 32017651
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Mesoscale simulations of two nucleosome-repeat length oligonucleosomes.
    Schlick T; Perisić O
    Phys Chem Chem Phys; 2009 Dec; 11(45):10729-37. PubMed ID: 20145817
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Nucleosome Clutches are Regulated by Chromatin Internal Parameters.
    Portillo-Ledesma S; Tsao LH; Wagley M; Lakadamyali M; Cosma MP; Schlick T
    J Mol Biol; 2021 Mar; 433(6):166701. PubMed ID: 33181171
    [TBL] [Abstract][Full Text] [Related]  

  • 5. The Dynamic Influence of Linker Histone Saturation within the Poly-Nucleosome Array.
    Woods DC; Rodríguez-Ropero F; Wereszczynski J
    J Mol Biol; 2021 May; 433(10):166902. PubMed ID: 33667509
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Computation of FRAP recovery times for linker histone - chromatin binding on the basis of Brownian dynamics simulations.
    Öztürk MA; Wade RC
    Biochim Biophys Acta Gen Subj; 2020 Oct; 1864(10):129653. PubMed ID: 32512172
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Changing chromatin fiber conformation by nucleosome repositioning.
    Müller O; Kepper N; Schöpflin R; Ettig R; Rippe K; Wedemann G
    Biophys J; 2014 Nov; 107(9):2141-50. PubMed ID: 25418099
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Mesoscale Modeling of Nucleosome-Binding Antibody PL2-6: Mono- versus Bivalent Chromatin Complexes.
    Myers CG; Olins DE; Olins AL; Schlick T
    Biophys J; 2020 May; 118(9):2066-2076. PubMed ID: 31668748
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nucleosome plasticity is a critical element of chromatin liquid-liquid phase separation and multivalent nucleosome interactions.
    Farr SE; Woods EJ; Joseph JA; Garaizar A; Collepardo-Guevara R
    Nat Commun; 2021 May; 12(1):2883. PubMed ID: 34001913
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Molecular mechanism of histone variant H2A.B on stability and assembly of nucleosome and chromatin structures.
    Peng J; Yuan C; Hua X; Zhang Z
    Epigenetics Chromatin; 2020 Jul; 13(1):28. PubMed ID: 32664941
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Breaths, Twists, and Turns of Atomistic Nucleosomes.
    Huertas J; Cojocaru V
    J Mol Biol; 2021 Mar; 433(6):166744. PubMed ID: 33309853
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Chromatin Fiber Folding Directed by Cooperative Histone Tail Acetylation and Linker Histone Binding.
    Bascom GD; Schlick T
    Biophys J; 2018 May; 114(10):2376-2385. PubMed ID: 29655483
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Chromatin Unfolding by Epigenetic Modifications Explained by Dramatic Impairment of Internucleosome Interactions: A Multiscale Computational Study.
    Collepardo-Guevara R; Portella G; Vendruscolo M; Frenkel D; Schlick T; Orozco M
    J Am Chem Soc; 2015 Aug; 137(32):10205-15. PubMed ID: 26192632
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Regulation of chromatin architecture by transcription factor binding.
    Portillo-Ledesma S; Chung S; Hoffman J; Schlick T
    Elife; 2024 Jan; 12():. PubMed ID: 38241351
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Chromatin fiber polymorphism triggered by variations of DNA linker lengths.
    Collepardo-Guevara R; Schlick T
    Proc Natl Acad Sci U S A; 2014 Jun; 111(22):8061-6. PubMed ID: 24847063
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Partial Unwrapping and Histone Tail Dynamics in Nucleosome Revealed by Coarse-Grained Molecular Simulations.
    Kenzaki H; Takada S
    PLoS Comput Biol; 2015 Aug; 11(8):e1004443. PubMed ID: 26262925
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Nucleosome positioning and composition modulate in silico chromatin flexibility.
    Clauvelin N; Lo P; Kulaeva OI; Nizovtseva EV; Diaz-Montes J; Zola J; Parashar M; Studitsky VM; Olson WK
    J Phys Condens Matter; 2015 Feb; 27(6):064112. PubMed ID: 25564155
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Hi-BDiSCO: folding 3D mesoscale genome structures from Hi-C data using brownian dynamics.
    Li Z; Schlick T
    Nucleic Acids Res; 2024 Jan; 52(2):583-599. PubMed ID: 38015443
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Evidence for heteromorphic chromatin fibers from analysis of nucleosome interactions.
    Grigoryev SA; Arya G; Correll S; Woodcock CL; Schlick T
    Proc Natl Acad Sci U S A; 2009 Aug; 106(32):13317-22. PubMed ID: 19651606
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.