BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

175 related articles for article (PubMed ID: 36163232)

  • 1. ProteinGLUE multi-task benchmark suite for self-supervised protein modeling.
    Capel H; Weiler R; Dijkstra M; Vleugels R; Bloem P; Feenstra KA
    Sci Rep; 2022 Sep; 12(1):16047. PubMed ID: 36163232
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MolPROP: Molecular Property prediction with multimodal language and graph fusion.
    Rollins ZA; Cheng AC; Metwally E
    J Cheminform; 2024 May; 16(1):56. PubMed ID: 38778388
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ProteinBERT: a universal deep-learning model of protein sequence and function.
    Brandes N; Ofer D; Peleg Y; Rappoport N; Linial M
    Bioinformatics; 2022 Apr; 38(8):2102-2110. PubMed ID: 35020807
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Self-supervised driven consistency training for annotation efficient histopathology image analysis.
    Srinidhi CL; Kim SW; Chen FD; Martel AL
    Med Image Anal; 2022 Jan; 75():102256. PubMed ID: 34717189
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MTNeuro: A Benchmark for Evaluating Representations of Brain Structure Across Multiple Levels of Abstraction.
    Quesada J; Sathidevi L; Liu R; Ahad N; Jackson JM; Azabou M; Xiao J; Liding C; Jin M; Urzay C; Gray-Roncal W; Johnson EC; Dyer EL
    Adv Neural Inf Process Syst; 2022; 35():5299-5314. PubMed ID: 38414814
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CLIN-X: pre-trained language models and a study on cross-task transfer for concept extraction in the clinical domain.
    Lange L; Adel H; Strötgen J; Klakow D
    Bioinformatics; 2022 Jun; 38(12):3267-3274. PubMed ID: 35485748
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DR.BENCH: Diagnostic Reasoning Benchmark for Clinical Natural Language Processing.
    Gao Y; Dligach D; Miller T; Caskey J; Sharma B; Churpek MM; Afshar M
    J Biomed Inform; 2023 Feb; 138():104286. PubMed ID: 36706848
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Molecular property prediction by semantic-invariant contrastive learning.
    Zhang Z; Xie A; Guan J; Zhou S
    Bioinformatics; 2023 Aug; 39(8):. PubMed ID: 37505457
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A Web Resource for Standardized Benchmark Datasets, Metrics, and Rosetta Protocols for Macromolecular Modeling and Design.
    Ó Conchúir S; Barlow KA; Pache RA; Ollikainen N; Kundert K; O'Meara MJ; Smith CA; Kortemme T
    PLoS One; 2015; 10(9):e0130433. PubMed ID: 26335248
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Benchmarking for biomedical natural language processing tasks with a domain specific ALBERT.
    Naseem U; Dunn AG; Khushi M; Kim J
    BMC Bioinformatics; 2022 Apr; 23(1):144. PubMed ID: 35448946
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Protein language models meet reduced amino acid alphabets.
    Ieremie I; Ewing RM; Niranjan M
    Bioinformatics; 2024 Feb; 40(2):. PubMed ID: 38310333
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A Systematic Benchmarking Analysis of Transfer Learning for Medical Image Analysis.
    Hosseinzadeh Taher MR; Haghighi F; Feng R; Gotway MB; Liang J
    Domain Adapt Represent Transf Afford Healthc AI Resour Divers Glob Health (2021); 2021; 12968():3-13. PubMed ID: 35713581
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Benchmarking and Boosting Transformers for Medical Image Classification.
    Ma D; Taher MRH; Pang J; Islam NU; Haghighi F; Gotway MB; Liang J
    Domain Adapt Represent Transf (2022); 2022 Sep; 13542():12-22. PubMed ID: 36383492
    [TBL] [Abstract][Full Text] [Related]  

  • 14. MpbPPI: a multi-task pre-training-based equivariant approach for the prediction of the effect of amino acid mutations on protein-protein interactions.
    Yue Y; Li S; Wang L; Liu H; Tong HHY; He S
    Brief Bioinform; 2023 Sep; 24(5):. PubMed ID: 37651610
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Protein-DNA binding sites prediction based on pre-trained protein language model and contrastive learning.
    Liu Y; Tian B
    Brief Bioinform; 2023 Nov; 25(1):. PubMed ID: 38171929
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Mapping medical image-text to a joint space via masked modeling.
    Chen Z; Du Y; Hu J; Liu Y; Li G; Wan X; Chang TH
    Med Image Anal; 2024 Jan; 91():103018. PubMed ID: 37976867
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Molecular property prediction by contrastive learning with attention-guided positive sample selection.
    Wang J; Guan J; Zhou S
    Bioinformatics; 2023 May; 39(5):. PubMed ID: 37079731
    [TBL] [Abstract][Full Text] [Related]  

  • 18. CPAE: Contrastive predictive autoencoder for unsupervised pre-training in health status prediction.
    Zhu S; Zheng W; Pang H
    Comput Methods Programs Biomed; 2023 Jun; 234():107484. PubMed ID: 37030137
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Bat4RCT: A suite of benchmark data and baseline methods for text classification of randomized controlled trials.
    Kim J; Kim J; Lee A; Kim J
    PLoS One; 2023; 18(3):e0283342. PubMed ID: 36961852
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Annotated dataset creation through large language models for non-english medical NLP.
    Frei J; Kramer F
    J Biomed Inform; 2023 Sep; 145():104478. PubMed ID: 37625508
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.