BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

314 related articles for article (PubMed ID: 36180850)

  • 1. Choice of DNA extraction method affects detection of bacterial taxa from retail chicken breast.
    Flint A; Laidlaw A; Li L; Raitt C; Rao M; Cooper A; Weedmark K; Carrillo C; Tamber S
    BMC Microbiol; 2022 Sep; 22(1):230. PubMed ID: 36180850
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A low-cost pipeline for soil microbiome profiling.
    Bollmann-Giolai A; Giolai M; Heavens D; Macaulay I; Malone J; Clark MD
    Microbiologyopen; 2020 Dec; 9(12):e1133. PubMed ID: 33225533
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?
    Angebault C; Payen M; Woerther PL; Rodriguez C; Botterel F
    PLoS One; 2020; 15(4):e0232215. PubMed ID: 32343737
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Improved DNA Extraction and Amplification Strategy for 16S rRNA Gene Amplicon-Based Microbiome Studies.
    Hong BY; Driscoll M; Gratalo D; Jarvie T; Weinstock GM
    Int J Mol Sci; 2024 Mar; 25(5):. PubMed ID: 38474213
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Are all faecal bacteria detected with equal efficiency? A study using next-generation sequencing and quantitative culture of infants' faecal samples.
    Sjöberg F; Nookaew I; Yazdanshenas S; Gio-Batta M; Adlerberth I; Wold AE
    J Microbiol Methods; 2020 Oct; 177():106018. PubMed ID: 32795633
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Does the human placenta delivered at term have a microbiota? Results of cultivation, quantitative real-time PCR, 16S rRNA gene sequencing, and metagenomics.
    Theis KR; Romero R; Winters AD; Greenberg JM; Gomez-Lopez N; Alhousseini A; Bieda J; Maymon E; Pacora P; Fettweis JM; Buck GA; Jefferson KK; Strauss JF; Erez O; Hassan SS
    Am J Obstet Gynecol; 2019 Mar; 220(3):267.e1-267.e39. PubMed ID: 30832984
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparison of four DNA extraction methods for comprehensive assessment of 16S rRNA bacterial diversity in marine biofilms using high-throughput sequencing.
    Corcoll N; Österlund T; Sinclair L; Eiler A; Kristiansson E; Backhaus T; Eriksson KM
    FEMS Microbiol Lett; 2017 Aug; 364(14):. PubMed ID: 28673033
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A Refined, Controlled 16S rRNA Gene Sequencing Approach Reveals Limited Detection of Cerebrospinal Fluid Microbiota in Children with Bacterial Meningitis.
    Pope CE; Whitlock KB; Hodor P; Limbrick DD; McDonald PJ; Hauptman J; Hoffman LR; Simon TD
    Microbiol Spectr; 2023 Jun; 11(3):e0036123. PubMed ID: 37140368
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform.
    de Muinck EJ; Trosvik P; Gilfillan GD; Hov JR; Sundaram AYM
    Microbiome; 2017 Jul; 5(1):68. PubMed ID: 28683838
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Impact of DNA extraction methods on 16S rRNA-based profiling of bacterial communities in cheese.
    Markusková B; Minarovičová J; Véghová A; Drahovská H; Kaclíková E
    J Microbiol Methods; 2021 May; 184():106210. PubMed ID: 33774112
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Sediment-associated microbial community profiling: sample pre-processing through sequential membrane filtration for 16S rRNA amplicon sequencing.
    Serrana JM; Watanabe K
    BMC Microbiol; 2022 Jan; 22(1):33. PubMed ID: 35057747
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evaluation of Methods for the Extraction of Microbial DNA From Vaginal Swabs Used for Microbiome Studies.
    Mattei V; Murugesan S; Al Hashmi M; Mathew R; James N; Singh P; Kumar M; Lakshmanan AP; Terranegra A; Al Khodor S; Tomei S
    Front Cell Infect Microbiol; 2019; 9():197. PubMed ID: 31245304
    [No Abstract]   [Full Text] [Related]  

  • 13. Host DNA depletion efficiency of microbiome DNA enrichment methods in infected tissue samples.
    Heravi FS; Zakrzewski M; Vickery K; Hu H
    J Microbiol Methods; 2020 Mar; 170():105856. PubMed ID: 32007505
    [TBL] [Abstract][Full Text] [Related]  

  • 14. High-throughput qPCR and 16S rRNA gene amplicon sequencing as complementary methods for the investigation of the cheese microbiota.
    Dreier M; Meola M; Berthoud H; Shani N; Wechsler D; Junier P
    BMC Microbiol; 2022 Feb; 22(1):48. PubMed ID: 35130830
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Assessment of food microbiological indicators applied on poultry carcasses by culture combined MALDI-TOF MS identification and 16S rRNA amplicon sequencing.
    Yu Z; Peruzy MF; Dumolin C; Joossens M; Houf K
    Food Microbiol; 2019 Sep; 82():53-61. PubMed ID: 31027815
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Full-length 16S rRNA gene amplicon analysis of human gut microbiota using MinION™ nanopore sequencing confers species-level resolution.
    Matsuo Y; Komiya S; Yasumizu Y; Yasuoka Y; Mizushima K; Takagi T; Kryukov K; Fukuda A; Morimoto Y; Naito Y; Okada H; Bono H; Nakagawa S; Hirota K
    BMC Microbiol; 2021 Jan; 21(1):35. PubMed ID: 33499799
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sequencing Depth Has a Stronger Effect than DNA Extraction on Soil Bacterial Richness Discovery.
    Sanchez-Cid C; Tignat-Perrier R; Franqueville L; Delaurière L; Schagat T; Vogel TM
    Biomolecules; 2022 Feb; 12(3):. PubMed ID: 35327556
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evaluation of commercially available DNA extraction kits for the analysis of the broiler chicken cecal microbiota.
    Pankoke H; Maus I; Loh G; Hüser A; Seifert J; Tilker A; Hark S; Sczyrba A; Pelzer S; Kleinbölting J
    FEMS Microbiol Lett; 2021 May; 368(8):. PubMed ID: 30915459
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Application of high-throughput pyrosequencing in the analysis of microbiota of food commodities procured from small and large retail outlets in a U.S. metropolitan area - A pilot study.
    Higgins D; Pal C; Sulaiman IM; Jia C; Zerwekh T; Dowd SE; Banerjee P
    Food Res Int; 2018 Mar; 105():29-40. PubMed ID: 29433218
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Managing Contamination and Diverse Bacterial Loads in 16S rRNA Deep Sequencing of Clinical Samples: Implications of the Law of Small Numbers.
    Dyrhovden R; Rippin M; Øvrebø KK; Nygaard RM; Ulvestad E; Kommedal Ø
    mBio; 2021 Jun; 12(3):e0059821. PubMed ID: 34101489
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.