These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

156 related articles for article (PubMed ID: 36215333)

  • 1. Experimental guidance for discovering genetic networks through hypothesis reduction on time series.
    Cummins B; Motta FC; Moseley RC; Deckard A; Campione S; Gameiro M; Gedeon T; Mischaikow K; Haase SB
    PLoS Comput Biol; 2022 Oct; 18(10):e1010145. PubMed ID: 36215333
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Refining current knowledge on the yeast FLR1 regulatory network by combined experimental and computational approaches.
    Teixeira MC; Dias PJ; Monteiro PT; Sala A; Oliveira AL; Freitas AT; Sá-Correia I
    Mol Biosyst; 2010 Dec; 6(12):2471-81. PubMed ID: 20938527
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inferring a transcriptional regulatory network of the cytokinesis-related genes by network component analysis.
    Chen SF; Juang YL; Chou WK; Lai JM; Huang CY; Kao CY; Wang FS
    BMC Syst Biol; 2009 Nov; 3():110. PubMed ID: 19943917
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Transcriptional regulatory networks in Saccharomyces cerevisiae.
    Lee TI; Rinaldi NJ; Robert F; Odom DT; Bar-Joseph Z; Gerber GK; Hannett NM; Harbison CT; Thompson CM; Simon I; Zeitlinger J; Jennings EG; Murray HL; Gordon DB; Ren B; Wyrick JJ; Tagne JB; Volkert TL; Fraenkel E; Gifford DK; Young RA
    Science; 2002 Oct; 298(5594):799-804. PubMed ID: 12399584
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Genetic reconstruction of a functional transcriptional regulatory network.
    Hu Z; Killion PJ; Iyer VR
    Nat Genet; 2007 May; 39(5):683-7. PubMed ID: 17417638
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Virtual mutagenesis of the yeast cyclins genetic network reveals complex dynamics of transcriptional control networks.
    Vohradska E; Vohradsky J
    PLoS One; 2011 Apr; 6(4):e18827. PubMed ID: 21541341
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Gene regulatory networks on transfer entropy (GRNTE): a novel approach to reconstruct gene regulatory interactions applied to a case study for the plant pathogen Phytophthora infestans.
    Castro JC; Valdés I; Gonzalez-García LN; Danies G; Cañas S; Winck FV; Ñústez CE; Restrepo S; Riaño-Pachón DM
    Theor Biol Med Model; 2019 Apr; 16(1):7. PubMed ID: 30961611
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Evolution of reduced co-activator dependence led to target expansion of a starvation response pathway.
    He BZ; Zhou X; O'Shea EK
    Elife; 2017 May; 6():. PubMed ID: 28485712
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Conservation of dynamic characteristics of transcriptional regulatory elements in periodic biological processes.
    Motta FC; Moseley RC; Cummins B; Deckard A; Haase SB
    BMC Bioinformatics; 2022 Mar; 23(1):94. PubMed ID: 35300586
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Reconstruction of transcriptional network from microarray data using combined mutual information and network-assisted regression.
    Wang XD; Qi YX; Jiang ZL
    IET Syst Biol; 2011 Mar; 5(2):95-102. PubMed ID: 21405197
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Integrating transcriptional and protein interaction networks to prioritize condition-specific master regulators.
    Padi M; Quackenbush J
    BMC Syst Biol; 2015 Nov; 9():80. PubMed ID: 26576632
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An ensemble learning approach to reverse-engineering transcriptional regulatory networks from time-series gene expression data.
    Ruan J; Deng Y; Perkins EJ; Zhang W
    BMC Genomics; 2009 Jul; 10 Suppl 1(Suppl 1):S8. PubMed ID: 19594885
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Using dynamic noise propagation to infer causal regulatory relationships in biochemical networks.
    Lipinski-Kruszka J; Stewart-Ornstein J; Chevalier MW; El-Samad H
    ACS Synth Biol; 2015 Mar; 4(3):258-64. PubMed ID: 24967515
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Predicting genetic interactions with random walks on biological networks.
    Chipman KC; Singh AK
    BMC Bioinformatics; 2009 Jan; 10():17. PubMed ID: 19138426
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
    Yang B; Xu Y; Maxwell A; Koh W; Gong P; Zhang C
    BMC Syst Biol; 2018 Dec; 12(Suppl 7):115. PubMed ID: 30547796
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Inferring the effective TOR-dependent network: a computational study in yeast.
    Mohammadi S; Subramaniam S; Grama A
    BMC Syst Biol; 2013 Aug; 7():84. PubMed ID: 24005029
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Quantitative characterization of the transcriptional regulatory network in the yeast cell cycle.
    Chen HC; Lee HC; Lin TY; Li WH; Chen BS
    Bioinformatics; 2004 Aug; 20(12):1914-27. PubMed ID: 15044243
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Transcriptional regulation of the genes involved in protein metabolism and processing in Saccharomyces cerevisiae.
    Dikicioglu D; Nightingale DJH; Wood V; Lilley KS; Oliver SG
    FEMS Yeast Res; 2019 Mar; 19(2):. PubMed ID: 30753445
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Inference of sparse combinatorial-control networks from gene-expression data: a message passing approach.
    Bailly-Bechet M; Braunstein A; Pagnani A; Weigt M; Zecchina R
    BMC Bioinformatics; 2010 Jun; 11():355. PubMed ID: 20587029
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data.
    Panchy NL; Lloyd JP; Shiu SH
    BMC Genomics; 2020 Feb; 21(1):159. PubMed ID: 32054475
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.