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3. NBLAST: a cluster variant of BLAST for NxN comparisons. Dumontier M; Hogue CW BMC Bioinformatics; 2002 May; 3():13. PubMed ID: 12019022 [TBL] [Abstract][Full Text] [Related]
4. Visual BLAST and visual FASTA: graphic workbenches for interactive analysis of full BLAST and FASTA outputs under MICROSOFT WINDOWS 95/NT. Durand P; Canard L; Mornon JP Comput Appl Biosci; 1997 Aug; 13(4):407-13. PubMed ID: 9283755 [TBL] [Abstract][Full Text] [Related]
6. Accessing NCBI data using the NCBI Sequence Viewer and Genome Data Viewer (GDV). Rangwala SH; Kuznetsov A; Ananiev V; Asztalos A; Borodin E; Evgeniev V; Joukov V; Lotov V; Pannu R; Rudnev D; Shkeda A; Weitz EM; Schneider VA Genome Res; 2021 Jan; 31(1):159-169. PubMed ID: 33239395 [TBL] [Abstract][Full Text] [Related]
7. D-GENIES: dot plot large genomes in an interactive, efficient and simple way. Cabanettes F; Klopp C PeerJ; 2018; 6():e4958. PubMed ID: 29888139 [TBL] [Abstract][Full Text] [Related]
8. easySEARCH: A user-friendly bioinformatics program that enables BLAST searching with a massive number of query sequences. Kim DW; Kim RN; Kim DS; Choi SH; Chae SH; Park HS Bioinformation; 2012; 8(16):792-4. PubMed ID: 23055632 [TBL] [Abstract][Full Text] [Related]
9. PLAN: a web platform for automating high-throughput BLAST searches and for managing and mining results. He J; Dai X; Zhao X BMC Bioinformatics; 2007 Feb; 8():53. PubMed ID: 17291345 [TBL] [Abstract][Full Text] [Related]
11. BLAST: improvements for better sequence analysis. Ye J; McGinnis S; Madden TL Nucleic Acids Res; 2006 Jul; 34(Web Server issue):W6-9. PubMed ID: 16845079 [TBL] [Abstract][Full Text] [Related]
12. Divide and Conquer (DC) BLAST: fast and easy BLAST execution within HPC environments. Yim WC; Cushman JC PeerJ; 2017; 5():e3486. PubMed ID: 28652936 [TBL] [Abstract][Full Text] [Related]
13. A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis. Sonnhammer EL; Durbin R Gene; 1995 Dec; 167(1-2):GC1-10. PubMed ID: 8566757 [TBL] [Abstract][Full Text] [Related]
14. BLAST-XYPlot Viewer: A Tool for Performing BLAST in Whole-Genome Sequenced Bacteria/Archaea and Visualize Whole Results Simultaneously. Pedraza-Pérez Y; Cuevas-Vede RA; Canto-Gómez ÁB; López-Pliego L; Gutiérrez-Ríos RM; Hernández-Lucas I; Rubín-Linares G; Martínez-Laguna Y; López-Olguín JF; Fuentes-Ramírez LE G3 (Bethesda); 2018 Jul; 8(7):2167-2172. PubMed ID: 29789313 [TBL] [Abstract][Full Text] [Related]
15. Profiling the BLAST bioinformatics application for load balancing on high-performance computing clusters. Cheng T; Chin PJ; Cha K; Petrick N; Mikailov M BMC Bioinformatics; 2022 Dec; 23(1):544. PubMed ID: 36526957 [TBL] [Abstract][Full Text] [Related]
16. PhyloGena--a user-friendly system for automated phylogenetic annotation of unknown sequences. Hanekamp K; Bohnebeck U; Beszteri B; Valentin K Bioinformatics; 2007 Apr; 23(7):793-801. PubMed ID: 17332025 [TBL] [Abstract][Full Text] [Related]
17. BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences. Tatusova TA; Madden TL FEMS Microbiol Lett; 1999 May; 174(2):247-50. PubMed ID: 10339815 [TBL] [Abstract][Full Text] [Related]
18. Genomic BLAST: custom-defined virtual databases for complete and unfinished genomes. Cummings L; Riley L; Black L; Souvorov A; Resenchuk S; Dondoshansky I; Tatusova T FEMS Microbiol Lett; 2002 Nov; 216(2):133-8. PubMed ID: 12435493 [TBL] [Abstract][Full Text] [Related]
19. muBLASTP: database-indexed protein sequence search on multicore CPUs. Zhang J; Misra S; Wang H; Feng WC BMC Bioinformatics; 2016 Nov; 17(1):443. PubMed ID: 27809763 [TBL] [Abstract][Full Text] [Related]
20. NCBI BLAST: a better web interface. Johnson M; Zaretskaya I; Raytselis Y; Merezhuk Y; McGinnis S; Madden TL Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W5-9. PubMed ID: 18440982 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]