BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

195 related articles for article (PubMed ID: 36245002)

  • 1. BRANEnet: embedding multilayer networks for omics data integration.
    Jagtap S; Pirayre A; Bidard F; Duval L; Malliaros FD
    BMC Bioinformatics; 2022 Oct; 23(1):429. PubMed ID: 36245002
    [TBL] [Abstract][Full Text] [Related]  

  • 2. BraneMF: integration of biological networks for functional analysis of proteins.
    Jagtap S; Çelikkanat A; Pirayre A; Bidard F; Duval L; Malliaros FD
    Bioinformatics; 2022 Dec; 38(24):5383-5389. PubMed ID: 36321881
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A multi-omics dataset of heat-shock response in the yeast RNA binding protein Mip6.
    Nuño-Cabanes C; Ugidos M; Tarazona S; Martín-Expósito M; Ferrer A; Rodríguez-Navarro S; Conesa A
    Sci Data; 2020 Feb; 7(1):69. PubMed ID: 32109230
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Effective Subject Representation based on Multi-omics Disease Networks using Graph Embedding.
    Hussein S; Vu T; Lange L; Bowler RP; Kechris KJ; Banaei-Kashani F
    Proceedings (IEEE Int Conf Bioinformatics Biomed); 2022 Dec; 2022():1911-1918. PubMed ID: 36776768
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Integration of multi-omics data using adaptive graph learning and attention mechanism for patient classification and biomarker identification.
    Ouyang D; Liang Y; Li L; Ai N; Lu S; Yu M; Liu X; Xie S
    Comput Biol Med; 2023 Sep; 164():107303. PubMed ID: 37586201
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Topological integration of RPPA proteomic data with multi-omics data for survival prediction in breast cancer via pathway activity inference.
    Kim TR; Jeong HH; Sohn KA
    BMC Med Genomics; 2019 Jul; 12(Suppl 5):94. PubMed ID: 31296204
    [TBL] [Abstract][Full Text] [Related]  

  • 7. MODILM: towards better complex diseases classification using a novel multi-omics data integration learning model.
    Zhong Y; Peng Y; Lin Y; Chen D; Zhang H; Zheng W; Chen Y; Wu C
    BMC Med Inform Decis Mak; 2023 May; 23(1):82. PubMed ID: 37147619
    [TBL] [Abstract][Full Text] [Related]  

  • 8. NECo: A node embedding algorithm for multiplex heterogeneous networks.
    Dursun C; Smith JR; Hayman GT; Kwitek AE; Bozdag S
    Proceedings (IEEE Int Conf Bioinformatics Biomed); 2020 Dec; 2020():146-149. PubMed ID: 34584774
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Integrate multi-omics data with biological interaction networks using Multi-view Factorization AutoEncoder (MAE).
    Ma T; Zhang A
    BMC Genomics; 2019 Dec; 20(Suppl 11):944. PubMed ID: 31856727
    [TBL] [Abstract][Full Text] [Related]  

  • 10. TEMINET: A Co-Informative and Trustworthy Multi-Omics Integration Network for Diagnostic Prediction.
    Luo H; Liang H; Liu H; Fan Z; Wei Y; Yao X; Cong S
    Int J Mol Sci; 2024 Jan; 25(3):. PubMed ID: 38338932
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Improved recovery of cell-cycle gene expression in Saccharomyces cerevisiae from regulatory interactions in multiple omics data.
    Panchy NL; Lloyd JP; Shiu SH
    BMC Genomics; 2020 Feb; 21(1):159. PubMed ID: 32054475
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SUBATOMIC: a SUbgraph BAsed mulTi-OMIcs clustering framework to analyze integrated multi-edge networks.
    Loers JU; Vermeirssen V
    BMC Bioinformatics; 2022 Sep; 23(1):363. PubMed ID: 36064320
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A Practical Guide to Inferring Multi-Omics Networks in Plant Systems.
    Clark NM; Hurgobin B; Kelley DR; Lewsey MG; Walley JW
    Methods Mol Biol; 2023; 2698():233-257. PubMed ID: 37682479
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Unsupervised neural network for single cell Multi-omics INTegration (UMINT): an application to health and disease.
    Maitra C; Seal DB; Das V; De RK
    Front Mol Biosci; 2023; 10():1184748. PubMed ID: 37293552
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Uncertainty-aware dynamic integration for multi-omics classification of tumors.
    Du L; Liu C; Wei R; Chen J
    J Cancer Res Clin Oncol; 2023 Jul; 149(7):3301-3312. PubMed ID: 35925427
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Integration of multi-omics data for integrative gene regulatory network inference.
    Zarayeneh N; Ko E; Oh JH; Suh S; Liu C; Gao J; Kim D; Kang M
    Int J Data Min Bioinform; 2017; 18(3):223-239. PubMed ID: 29354189
    [TBL] [Abstract][Full Text] [Related]  

  • 17. DeFusion: a denoised network regularization framework for multi-omics integration.
    Wang W; Zhang X; Dai DQ
    Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33822879
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Multi-omics single-cell data integration and regulatory inference with graph-linked embedding.
    Cao ZJ; Gao G
    Nat Biotechnol; 2022 Oct; 40(10):1458-1466. PubMed ID: 35501393
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Using empirical biological knowledge to infer regulatory networks from multi-omics data.
    Pačínková A; Popovici V
    BMC Bioinformatics; 2022 Aug; 23(1):351. PubMed ID: 35996085
    [TBL] [Abstract][Full Text] [Related]  

  • 20. OmiEmbed: A Unified Multi-Task Deep Learning Framework for Multi-Omics Data.
    Zhang X; Xing Y; Sun K; Guo Y
    Cancers (Basel); 2021 Jun; 13(12):. PubMed ID: 34207255
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.