191 related articles for article (PubMed ID: 36246588)
1. Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing.
Guan D; Halstead MM; Islas-Trejo AD; Goszczynski DE; Cheng HH; Ross PJ; Zhou H
Front Genet; 2022; 13():997460. PubMed ID: 36246588
[TBL] [Abstract][Full Text] [Related]
2. Transcriptome annotation of 17 porcine tissues using nanopore sequencing technology.
Li J; Guan D; Halstead MM; Islas-Trejo AD; Goszczynski DE; Ernst CW; Cheng H; Ross P; Zhou H
Anim Genet; 2023 Feb; 54(1):35-44. PubMed ID: 36385508
[TBL] [Abstract][Full Text] [Related]
3. Large-Scale Multiplexing Permits Full-Length Transcriptome Annotation of 32 Bovine Tissues From a Single Nanopore Flow Cell.
Halstead MM; Islas-Trejo A; Goszczynski DE; Medrano JF; Zhou H; Ross PJ
Front Genet; 2021; 12():664260. PubMed ID: 34093657
[TBL] [Abstract][Full Text] [Related]
4. A
Ramberg S; Høyheim B; Østbye TK; Andreassen R
Front Genet; 2021; 12():656334. PubMed ID: 33986770
[TBL] [Abstract][Full Text] [Related]
5. Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology.
Beiki H; Murdoch BM; Park CA; Kern C; Kontechy D; Becker G; Rincon G; Jiang H; Zhou H; Thorne J; Koltes JE; Michal JJ; Davenport K; Rijnkels M; Ross PJ; Hu R; Corum S; McKay S; Smith TPL; Liu W; Ma W; Zhang X; Xu X; Han X; Jiang Z; Hu ZL; Reecy JM
Gigascience; 2024 Jan; 13():. PubMed ID: 38626724
[TBL] [Abstract][Full Text] [Related]
6. Depletion of Hemoglobin Transcripts and Long-Read Sequencing Improves the Transcriptome Annotation of the Polar Bear (
Byrne A; Supple MA; Volden R; Laidre KL; Shapiro B; Vollmers C
Front Genet; 2019; 10():643. PubMed ID: 31379921
[TBL] [Abstract][Full Text] [Related]
7. UNAGI: Yeast Transcriptome Reconstruction and Gene Discovery Using Nanopore Sequencing.
Al Kadi M; Jung N; Okuzaki D
Methods Mol Biol; 2022; 2477():79-89. PubMed ID: 35524113
[TBL] [Abstract][Full Text] [Related]
8. Identification of Protein Isoforms Using Reference Databases Built from Long and Short Read RNA-Sequencing.
Tay AP; Hamey JJ; Martyn GE; Wilson LOW; Wilkins MR
J Proteome Res; 2022 Jul; 21(7):1628-1639. PubMed ID: 35612954
[TBL] [Abstract][Full Text] [Related]
9. A survey of the complex transcriptome from the highly polyploid sugarcane genome using full-length isoform sequencing and de novo assembly from short read sequencing.
Hoang NV; Furtado A; Mason PJ; Marquardt A; Kasirajan L; Thirugnanasambandam PP; Botha FC; Henry RJ
BMC Genomics; 2017 May; 18(1):395. PubMed ID: 28532419
[TBL] [Abstract][Full Text] [Related]
10. Accurate transcriptome assembly by Nanopore RNA sequencing reveals novel functional transcripts in hepatocellular carcinoma.
Fang Y; Chen G; Chen F; Hu E; Dong X; Li Z; He L; Sun Y; Qiu L; Xu H; Cai Z; Liu X
Cancer Sci; 2021 Sep; 112(9):3555-3568. PubMed ID: 34255396
[TBL] [Abstract][Full Text] [Related]
11. Illuminating the dark side of the human transcriptome with long read transcript sequencing.
Kuo RI; Cheng Y; Zhang R; Brown JWS; Smith J; Archibald AL; Burt DW
BMC Genomics; 2020 Oct; 21(1):751. PubMed ID: 33126848
[TBL] [Abstract][Full Text] [Related]
12. Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome research.
Seok J; Xu W; Jiang H; Davis RW; Xiao W
PLoS One; 2012; 7(2):e31440. PubMed ID: 22312447
[TBL] [Abstract][Full Text] [Related]
13. Normalized long read RNA sequencing in chicken reveals transcriptome complexity similar to human.
Kuo RI; Tseng E; Eory L; Paton IR; Archibald AL; Burt DW
BMC Genomics; 2017 Apr; 18(1):323. PubMed ID: 28438136
[TBL] [Abstract][Full Text] [Related]
14. Multiple Long-Read Sequencing Survey of Herpes Simplex Virus Dynamic Transcriptome.
Tombácz D; Moldován N; Balázs Z; Gulyás G; Csabai Z; Boldogkői M; Snyder M; Boldogkői Z
Front Genet; 2019; 10():834. PubMed ID: 31608102
[TBL] [Abstract][Full Text] [Related]
15. Long-read sequencing uncovers a complex transcriptome topology in varicella zoster virus.
Prazsák I; Moldován N; Balázs Z; Tombácz D; Megyeri K; Szűcs A; Csabai Z; Boldogkői Z
BMC Genomics; 2018 Dec; 19(1):873. PubMed ID: 30514211
[TBL] [Abstract][Full Text] [Related]
16. Profiling the polyadenylated transcriptome of extracellular vesicles with long-read nanopore sequencing.
Padilla JA; Barutcu S; Malet L; Deschamps-Francoeur G; Calderon V; Kwon E; Lécuyer E
BMC Genomics; 2023 Sep; 24(1):564. PubMed ID: 37736705
[TBL] [Abstract][Full Text] [Related]
17. isONform: reference-free transcriptome reconstruction from Oxford Nanopore data.
Petri AJ; Sahlin K
Bioinformatics; 2023 Jun; 39(39 Suppl 1):i222-i231. PubMed ID: 37387174
[TBL] [Abstract][Full Text] [Related]
18. Transcriptome profiling analysis of tea plant (Camellia sinensis) using Oxford Nanopore long-read RNA-Seq technology.
Wang F; Chen Z; Pei H; Guo Z; Wen D; Liu R; Song B
Gene; 2021 Feb; 769():145247. PubMed ID: 33096183
[TBL] [Abstract][Full Text] [Related]
19. Uncovering full-length transcript isoforms of sugarcane cultivar Khon Kaen 3 using single-molecule long-read sequencing.
Piriyapongsa J; Kaewprommal P; Vaiwsri S; Anuntakarun S; Wirojsirasak W; Punpee P; Klomsa-Ard P; Shaw PJ; Pootakham W; Yoocha T; Sangsrakru D; Tangphatsornruang S; Tongsima S; Tragoonrung S
PeerJ; 2018; 6():e5818. PubMed ID: 30397543
[TBL] [Abstract][Full Text] [Related]
20. Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species.
Kern C; Wang Y; Chitwood J; Korf I; Delany M; Cheng H; Medrano JF; Van Eenennaam AL; Ernst C; Ross P; Zhou H
BMC Genomics; 2018 Sep; 19(1):684. PubMed ID: 30227846
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
