These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
203 related articles for article (PubMed ID: 36250868)
1. Single Nucleotide Polymorphism-Based Real-Time PCR Screening Assay for Rapid Tracking of Bacterial Infection Clusters To Complement Whole-Genome Sequencing Efforts during Outbreak Investigations. Treffon J; Heppner B; Eismann J; Bothe J; Omengo B; Mellmann A Microbiol Spectr; 2022 Dec; 10(6):e0303622. PubMed ID: 36250868 [TBL] [Abstract][Full Text] [Related]
2. Amplified fragment length polymorphism and whole genome sequencing: a comparison of methods in the investigation of a nosocomial outbreak with vancomycin resistant enterococci. Janes VA; Notermans DW; Spijkerman IJB; Visser CE; Jakobs ME; van Houdt R; Willems RJL; de Jong MD; Schultsz C; Matamoros S Antimicrob Resist Infect Control; 2019; 8():153. PubMed ID: 31572571 [TBL] [Abstract][Full Text] [Related]
3. Tracking a tuberculosis outbreak over 21 years: strain-specific single-nucleotide polymorphism typing combined with targeted whole-genome sequencing. Stucki D; Ballif M; Bodmer T; Coscolla M; Maurer AM; Droz S; Butz C; Borrell S; Längle C; Feldmann J; Furrer H; Mordasini C; Helbling P; Rieder HL; Egger M; Gagneux S; Fenner L J Infect Dis; 2015 Apr; 211(8):1306-16. PubMed ID: 25362193 [TBL] [Abstract][Full Text] [Related]
4. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas. Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557 [TBL] [Abstract][Full Text] [Related]
5. Evaluation of whole-genome sequencing for outbreak detection of Verotoxigenic Escherichia coli O157:H7 from the Canadian perspective. Rumore J; Tschetter L; Kearney A; Kandar R; McCormick R; Walker M; Peterson CL; Reimer A; Nadon C BMC Genomics; 2018 Dec; 19(1):870. PubMed ID: 30514209 [TBL] [Abstract][Full Text] [Related]
8. Whole Genome Sequence Analysis of a Large Isoniazid-Resistant Tuberculosis Outbreak in London: A Retrospective Observational Study. Casali N; Broda A; Harris SR; Parkhill J; Brown T; Drobniewski F PLoS Med; 2016 Oct; 13(10):e1002137. PubMed ID: 27701423 [TBL] [Abstract][Full Text] [Related]
9. Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study. Roetzer A; Diel R; Kohl TA; Rückert C; Nübel U; Blom J; Wirth T; Jaenicke S; Schuback S; Rüsch-Gerdes S; Supply P; Kalinowski J; Niemann S PLoS Med; 2013; 10(2):e1001387. PubMed ID: 23424287 [TBL] [Abstract][Full Text] [Related]
10. Simultaneous Hospital Outbreaks of New Delhi Metallo-β-Lactamase-Producing Lo S; Lolom I; Goldstein V; Petitjean M; Rondinaud E; Bunel-Gourdy V; Tran Dinh A; Wicky PH; Ruppé E; d'Humières C; Lucet JC; Armand-Lefèvre L Microbiol Spectr; 2022 Apr; 10(2):e0228721. PubMed ID: 35311539 [TBL] [Abstract][Full Text] [Related]
11. Characterization of Foodborne Outbreaks of Salmonella enterica Serovar Enteritidis with Whole-Genome Sequencing Single Nucleotide Polymorphism-Based Analysis for Surveillance and Outbreak Detection. Taylor AJ; Lappi V; Wolfgang WJ; Lapierre P; Palumbo MJ; Medus C; Boxrud D J Clin Microbiol; 2015 Oct; 53(10):3334-40. PubMed ID: 26269623 [TBL] [Abstract][Full Text] [Related]
12. Development of Candida auris Short Tandem Repeat Typing and Its Application to a Global Collection of Isolates. de Groot T; Puts Y; Berrio I; Chowdhary A; Meis JF mBio; 2020 Jan; 11(1):. PubMed ID: 31911492 [No Abstract] [Full Text] [Related]
13. Rapid Identification of Relevant Microbial Strains by Identifying Multiple Marker Single Nucleotide Polymorphisms via Amplicon Sequencing: Epidemic Monkeypox Virus as a Proof of Concept. Buenestado-Serrano S; Herranz M; Palomino-Cabrera R; Rodríguez-Grande C; Peñas-Utrilla D; Molero-Salinas A; Veintimilla C; Catalán P; Alonso R; Muñoz P; Pérez-Lago L; García de Viedma D Microbiol Spectr; 2023 Feb; 11(1):e0419622. PubMed ID: 36602352 [TBL] [Abstract][Full Text] [Related]
14. Application of whole genome sequence data in analyzing the molecular epidemiology of Shiga toxin-producing Escherichia coli O157:H7/H. Yokoyama E; Hirai S; Ishige T; Murakami S Int J Food Microbiol; 2018 Jan; 264():39-45. PubMed ID: 29107195 [TBL] [Abstract][Full Text] [Related]
15. Assessing the genome level diversity of Listeria monocytogenes from contaminated ice cream and environmental samples linked to a listeriosis outbreak in the United States. Chen Y; Luo Y; Curry P; Timme R; Melka D; Doyle M; Parish M; Hammack TS; Allard MW; Brown EW; Strain EA PLoS One; 2017; 12(2):e0171389. PubMed ID: 28166293 [TBL] [Abstract][Full Text] [Related]
16. Whole-genome-based Mycobacterium tuberculosis surveillance: a standardized, portable, and expandable approach. Kohl TA; Diel R; Harmsen D; Rothgänger J; Walter KM; Merker M; Weniger T; Niemann S J Clin Microbiol; 2014 Jul; 52(7):2479-86. PubMed ID: 24789177 [TBL] [Abstract][Full Text] [Related]
17. Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study. Pankhurst LJ; Del Ojo Elias C; Votintseva AA; Walker TM; Cole K; Davies J; Fermont JM; Gascoyne-Binzi DM; Kohl TA; Kong C; Lemaitre N; Niemann S; Paul J; Rogers TR; Roycroft E; Smith EG; Supply P; Tang P; Wilcox MH; Wordsworth S; Wyllie D; Xu L; Crook DW; Lancet Respir Med; 2016 Jan; 4(1):49-58. PubMed ID: 26669893 [TBL] [Abstract][Full Text] [Related]
18. Whole-Genome Sequencing of Bacterial Pathogens: the Future of Nosocomial Outbreak Analysis. Quainoo S; Coolen JPM; van Hijum SAFT; Huynen MA; Melchers WJG; van Schaik W; Wertheim HFL Clin Microbiol Rev; 2017 Oct; 30(4):1015-1063. PubMed ID: 28855266 [TBL] [Abstract][Full Text] [Related]
19. Whole-Genome Sequencing Surveillance and Machine Learning of the Electronic Health Record for Enhanced Healthcare Outbreak Detection. Sundermann AJ; Chen J; Kumar P; Ayres AM; Cho ST; Ezeonwuka C; Griffith MP; Miller JK; Mustapha MM; Pasculle AW; Saul MI; Shutt KA; Srinivasa V; Waggle K; Snyder DJ; Cooper VS; Van Tyne D; Snyder GM; Marsh JW; Dubrawski A; Roberts MS; Harrison LH Clin Infect Dis; 2022 Aug; 75(3):476-482. PubMed ID: 34791136 [TBL] [Abstract][Full Text] [Related]
20. Effective Surveillance Using Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Enterohemorrhagic Escherichia coli O157. Lee K; Izumiya H; Iyoda S; Ohnishi M Appl Environ Microbiol; 2019 Sep; 85(17):. PubMed ID: 31227555 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]