These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

112 related articles for article (PubMed ID: 36269599)

  • 1. Robust methylation-based classification of brain tumours using nanopore sequencing.
    Kuschel LP; Hench J; Frank S; Hench IB; Girard E; Blanluet M; Masliah-Planchon J; Misch M; Onken J; Czabanka M; Yuan D; Lukassen S; Karau P; Ishaque N; Hain EG; Heppner F; Idbaih A; Behr N; Harms C; Capper D; Euskirchen P
    Neuropathol Appl Neurobiol; 2023 Feb; 49(1):e12856. PubMed ID: 36269599
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Same-day genomic and epigenomic diagnosis of brain tumors using real-time nanopore sequencing.
    Euskirchen P; Bielle F; Labreche K; Kloosterman WP; Rosenberg S; Daniau M; Schmitt C; Masliah-Planchon J; Bourdeaut F; Dehais C; Marie Y; Delattre JY; Idbaih A
    Acta Neuropathol; 2017 Nov; 134(5):691-703. PubMed ID: 28638988
    [TBL] [Abstract][Full Text] [Related]  

  • 3. EpiDiP/NanoDiP: a versatile unsupervised machine learning edge computing platform for epigenomic tumour diagnostics.
    Hench J; Hultschig C; Brugger J; Mariani L; Guzman R; Soleman J; Leu S; Benton M; Stec IM; Hench IB; Hoffmann P; Harter P; Weber KJ; Albers A; Thomas C; Hasselblatt M; Schüller U; Restelli L; Capper D; Hewer E; Diebold J; Kolenc D; Schneider UC; Rushing E; Della Monica R; Chiariotti L; Sill M; Schrimpf D; von Deimling A; Sahm F; Kölsche C; Tolnay M; Frank S
    Acta Neuropathol Commun; 2024 Apr; 12(1):51. PubMed ID: 38576030
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Whole human genome 5'-mC methylation analysis using long read nanopore sequencing.
    Silva C; Machado M; Ferrão J; Sebastião Rodrigues A; Vieira L
    Epigenetics; 2022 Dec; 17(13):1961-1975. PubMed ID: 35856633
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Evaluation of nanopore sequencing for epigenetic epidemiology: a comparison with DNA methylation microarrays.
    Flynn R; Washer S; Jeffries AR; Andrayas A; Shireby G; Kumari M; Schalkwyk LC; Mill J; Hannon E
    Hum Mol Genet; 2022 Sep; 31(18):3181-3190. PubMed ID: 35567415
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Rapid DNA methylation-based classification of pediatric brain tumors from ultrasonic aspirate specimens.
    Simon M; Kuschel LP; von Hoff K; Yuan D; Hernáiz Driever P; Hain EG; Koch A; Capper D; Schulz M; Thomale UW; Euskirchen P
    J Neurooncol; 2024 Aug; 169(1):73-83. PubMed ID: 38769169
    [TBL] [Abstract][Full Text] [Related]  

  • 7. DNA methylation-calling tools for Oxford Nanopore sequencing: a survey and human epigenome-wide evaluation.
    Liu Y; Rosikiewicz W; Pan Z; Jillette N; Wang P; Taghbalout A; Foox J; Mason C; Carroll M; Cheng A; Li S
    Genome Biol; 2021 Oct; 22(1):295. PubMed ID: 34663425
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Intraoperative DNA methylation classification of brain tumors impacts neurosurgical strategy.
    Djirackor L; Halldorsson S; Niehusmann P; Leske H; Capper D; Kuschel LP; Pahnke J; Due-Tønnessen BJ; Langmoen IA; Sandberg CJ; Euskirchen P; Vik-Mo EO
    Neurooncol Adv; 2021; 3(1):vdab149. PubMed ID: 34729487
    [TBL] [Abstract][Full Text] [Related]  

  • 9. DNA methylation alterations across time and space in paediatric brain tumours.
    Wenger A; Ferreyra Vega S; Schepke E; Löfgren M; Olsson Bontell T; Tisell M; Nilsson D; Kling T; Carén H
    Acta Neuropathol Commun; 2022 Jul; 10(1):105. PubMed ID: 35842717
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Cas9-targeted nanopore sequencing reveals epigenetic heterogeneity after
    Goldsmith C; Cohen D; Dubois A; Martinez MG; Petitjean K; Corlu A; Testoni B; Hernandez-Vargas H; Chemin I
    Microb Genom; 2021 May; 7(5):. PubMed ID: 34003741
    [TBL] [Abstract][Full Text] [Related]  

  • 11. DNA methylation profiling improves routine diagnosis of paediatric central nervous system tumours: A prospective population-based study.
    Schepke E; Löfgren M; Pietsch T; Olsson Bontell T; Kling T; Wenger A; Ferreyra Vega S; Danielsson A; Dosa S; Holm S; Öberg A; Nyman P; Eliasson-Hofvander M; Sandström PE; Pfister SM; Lannering B; Sabel M; Carén H
    Neuropathol Appl Neurobiol; 2022 Oct; 48(6):e12838. PubMed ID: 35892159
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Nanopore Sequencing and Data Analysis for Base-Resolution Genome-Wide 5-Methylcytosine Profiling.
    Angeloni A; Ferguson J; Bogdanovic O
    Methods Mol Biol; 2022; 2458():75-94. PubMed ID: 35103963
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Methylation of the TERT promoter and risk stratification of childhood brain tumours: an integrative genomic and molecular study.
    Castelo-Branco P; Choufani S; Mack S; Gallagher D; Zhang C; Lipman T; Zhukova N; Walker EJ; Martin D; Merino D; Wasserman JD; Elizabeth C; Alon N; Zhang L; Hovestadt V; Kool M; Jones DT; Zadeh G; Croul S; Hawkins C; Hitzler J; Wang JC; Baruchel S; Dirks PB; Malkin D; Pfister S; Taylor MD; Weksberg R; Tabori U
    Lancet Oncol; 2013 May; 14(6):534-42. PubMed ID: 23598174
    [TBL] [Abstract][Full Text] [Related]  

  • 14. DNA methylation-based classification and grading system for meningioma: a multicentre, retrospective analysis.
    Sahm F; Schrimpf D; Stichel D; Jones DTW; Hielscher T; Schefzyk S; Okonechnikov K; Koelsche C; Reuss DE; Capper D; Sturm D; Wirsching HG; Berghoff AS; Baumgarten P; Kratz A; Huang K; Wefers AK; Hovestadt V; Sill M; Ellis HP; Kurian KM; Okuducu AF; Jungk C; Drueschler K; Schick M; Bewerunge-Hudler M; Mawrin C; Seiz-Rosenhagen M; Ketter R; Simon M; Westphal M; Lamszus K; Becker A; Koch A; Schittenhelm J; Rushing EJ; Collins VP; Brehmer S; Chavez L; Platten M; Hänggi D; Unterberg A; Paulus W; Wick W; Pfister SM; Mittelbronn M; Preusser M; Herold-Mende C; Weller M; von Deimling A
    Lancet Oncol; 2017 May; 18(5):682-694. PubMed ID: 28314689
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Invited Review: DNA methylation-based classification of paediatric brain tumours.
    Perez E; Capper D
    Neuropathol Appl Neurobiol; 2020 Feb; 46(1):28-47. PubMed ID: 31955441
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Detecting cell-of-origin and cancer-specific methylation features of cell-free DNA from Nanopore sequencing.
    Katsman E; Orlanski S; Martignano F; Fox-Fisher I; Shemer R; Dor Y; Zick A; Eden A; Petrini I; Conticello SG; Berman BP
    Genome Biol; 2022 Jul; 23(1):158. PubMed ID: 35841107
    [TBL] [Abstract][Full Text] [Related]  

  • 17. DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning.
    Ni P; Huang N; Zhang Z; Wang DP; Liang F; Miao Y; Xiao CL; Luo F; Wang J
    Bioinformatics; 2019 Nov; 35(22):4586-4595. PubMed ID: 30994904
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Simultaneous profiling of histone modifications and DNA methylation via nanopore sequencing.
    Yue X; Xie Z; Li M; Wang K; Li X; Zhang X; Yan J; Yin Y
    Nat Commun; 2022 Dec; 13(1):7939. PubMed ID: 36566265
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Megabase-scale methylation phasing using nanopore long reads and NanoMethPhase.
    Akbari V; Garant JM; O'Neill K; Pandoh P; Moore R; Marra MA; Hirst M; Jones SJM
    Genome Biol; 2021 Feb; 22(1):68. PubMed ID: 33618748
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Long-read whole-genome methylation patterning using enzymatic base conversion and nanopore sequencing.
    Sakamoto Y; Zaha S; Nagasawa S; Miyake S; Kojima Y; Suzuki A; Suzuki Y; Seki M
    Nucleic Acids Res; 2021 Aug; 49(14):e81. PubMed ID: 34019650
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.