These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. AlphaPeptStats: an open-source Python package for automated and scalable statistical analysis of mass spectrometry-based proteomics. Krismer E; Bludau I; Strauss MT; Mann M Bioinformatics; 2023 Aug; 39(8):. PubMed ID: 37527012 [TBL] [Abstract][Full Text] [Related]
4. Hi-LASSO: High-performance python and apache spark packages for feature selection with high-dimensional data. Jo J; Jung S; Park J; Kim Y; Kang M PLoS One; 2022; 17(12):e0278570. PubMed ID: 36455001 [TBL] [Abstract][Full Text] [Related]
6. CNApy: a CellNetAnalyzer GUI in Python for analyzing and designing metabolic networks. Thiele S; von Kamp A; Bekiaris PS; Schneider P; Klamt S Bioinformatics; 2022 Feb; 38(5):1467-1469. PubMed ID: 34878104 [TBL] [Abstract][Full Text] [Related]
7. NeuroPycon: An open-source python toolbox for fast multi-modal and reproducible brain connectivity pipelines. Meunier D; Pascarella A; Altukhov D; Jas M; Combrisson E; Lajnef T; Bertrand-Dubois D; Hadid V; Alamian G; Alves J; Barlaam F; Saive AL; Dehgan A; Jerbi K Neuroimage; 2020 Oct; 219():117020. PubMed ID: 32522662 [TBL] [Abstract][Full Text] [Related]
8. multiSyncPy: A Python package for assessing multivariate coordination dynamics. Hudson D; Wiltshire TJ; Atzmueller M Behav Res Methods; 2023 Feb; 55(2):932-962. PubMed ID: 35513768 [TBL] [Abstract][Full Text] [Related]
9. Pyteomics--a Python framework for exploratory data analysis and rapid software prototyping in proteomics. Goloborodko AA; Levitsky LI; Ivanov MV; Gorshkov MV J Am Soc Mass Spectrom; 2013 Feb; 24(2):301-4. PubMed ID: 23292976 [TBL] [Abstract][Full Text] [Related]
10. Discretization of parametrizable signal manifolds. Vural E; Frossard P IEEE Trans Image Process; 2011 Dec; 20(12):3621-33. PubMed ID: 21606033 [TBL] [Abstract][Full Text] [Related]
11. Scedar: A scalable Python package for single-cell RNA-seq exploratory data analysis. Zhang Y; Kim MS; Reichenberger ER; Stear B; Taylor DM PLoS Comput Biol; 2020 Apr; 16(4):e1007794. PubMed ID: 32339163 [TBL] [Abstract][Full Text] [Related]
12. AlphaMap: an open-source Python package for the visual annotation of proteomics data with sequence-specific knowledge. Voytik E; Bludau I; Willems S; Hansen FM; Brunner AD; Strauss MT; Mann M Bioinformatics; 2022 Jan; 38(3):849-852. PubMed ID: 34586352 [TBL] [Abstract][Full Text] [Related]
13. pymia: A Python package for data handling and evaluation in deep learning-based medical image analysis. Jungo A; Scheidegger O; Reyes M; Balsiger F Comput Methods Programs Biomed; 2021 Jan; 198():105796. PubMed ID: 33137700 [TBL] [Abstract][Full Text] [Related]
14. A Python package for parsing, validating, mapping and formatting sequence variants using HGVS nomenclature. Hart RK; Rico R; Hare E; Garcia J; Westbrook J; Fusaro VA Bioinformatics; 2015 Jan; 31(2):268-70. PubMed ID: 25273102 [TBL] [Abstract][Full Text] [Related]