229 related articles for article (PubMed ID: 36298683)
1. Intrahost SARS-CoV-2 k-mer Identification Method (iSKIM) for Rapid Detection of Mutations of Concern Reveals Emergence of Global Mutation Patterns.
Thommana A; Shakya M; Gandhi J; Fung CK; Chain PSG; Maljkovic Berry I; Conte MA
Viruses; 2022 Sep; 14(10):. PubMed ID: 36298683
[TBL] [Abstract][Full Text] [Related]
2. Intrahost SARS-CoV-2 k-mer identification method (iSKIM) for rapid detection of mutations of concern reveals emergence of global mutation patterns.
Thommana A; Shakya M; Gandhi J; Fung CK; Chain PSG; Berry IM; Conte MA
bioRxiv; 2022 Aug; ():. PubMed ID: 36032969
[TBL] [Abstract][Full Text] [Related]
3. Real-Time RT-PCR Allelic Discrimination Assay for Detection of N501Y Mutation in the Spike Protein of SARS-CoV-2 Associated with B.1.1.7 Variant of Concern.
Abdulnoor M; Eshaghi A; Perusini SJ; Broukhanski G; Corbeil A; Cronin K; Fittipaldi N; Forbes JD; Guthrie JL; Kus JV; Li Y; Majury A; Mallo GV; Mazzulli T; Melano RG; Olsha R; Sullivan A; Tran V; Patel SN; Allen VG; Gubbay JB
Microbiol Spectr; 2022 Feb; 10(1):e0068121. PubMed ID: 35170989
[TBL] [Abstract][Full Text] [Related]
4. Emergency SARS-CoV-2 Variants of Concern: Novel Multiplex Real-Time RT-PCR Assay for Rapid Detection and Surveillance.
Chung HY; Jian MJ; Chang CK; Lin JC; Yeh KM; Chen CW; Hsieh SS; Hung KS; Tang SH; Perng CL; Chang FY; Wang CH; Shang HS
Microbiol Spectr; 2022 Feb; 10(1):e0251321. PubMed ID: 35196812
[TBL] [Abstract][Full Text] [Related]
5. Precision Response to the Rise of the SARS-CoV-2 B.1.1.7 Variant of Concern by Combining Novel PCR Assays and Genome Sequencing for Rapid Variant Detection and Surveillance.
Zelyas N; Pabbaraju K; Croxen MA; Lynch T; Buss E; Murphy SA; Shokoples S; Wong A; Kanji JN; Tipples G
Microbiol Spectr; 2021 Sep; 9(1):e0031521. PubMed ID: 34378966
[TBL] [Abstract][Full Text] [Related]
6. CRISPR-Cas12a-Based Detection for the Major SARS-CoV-2 Variants of Concern.
Liang Y; Lin H; Zou L; Zhao J; Li B; Wang H; Lu J; Sun J; Yang X; Deng X; Tang S
Microbiol Spectr; 2021 Dec; 9(3):e0101721. PubMed ID: 34787487
[TBL] [Abstract][Full Text] [Related]
7. Developing an Amplification Refractory Mutation System-Quantitative Reverse Transcription-PCR Assay for Rapid and Sensitive Screening of SARS-CoV-2 Variants of Concern.
Xiong D; Zhang X; Shi M; Wang N; He P; Dong Z; Zhong J; Luo J; Wang Y; Yu J; Wei H
Microbiol Spectr; 2022 Feb; 10(1):e0143821. PubMed ID: 34985323
[TBL] [Abstract][Full Text] [Related]
8. [Genomics and epidemiology of SARS-CoV-2 lineage].
Sukegawa S; Takeuchi H
Uirusu; 2021; 71(1):19-32. PubMed ID: 35526991
[TBL] [Abstract][Full Text] [Related]
9. CoVigator-A Knowledge Base for Navigating SARS-CoV-2 Genomic Variants.
Bukur T; Riesgo-Ferreiro P; Sorn P; Gudimella R; Hausmann J; Rösler T; Löwer M; Schrörs B; Sahin U
Viruses; 2023 Jun; 15(6):. PubMed ID: 37376690
[TBL] [Abstract][Full Text] [Related]
10. Evolution, Mode of Transmission, and Mutational Landscape of Newly Emerging SARS-CoV-2 Variants.
Chakraborty C; Sharma AR; Bhattacharya M; Agoramoorthy G; Lee SS
mBio; 2021 Aug; 12(4):e0114021. PubMed ID: 34465019
[TBL] [Abstract][Full Text] [Related]
11. Efficient SARS-CoV-2 variant detection and monitoring with Spike Screen next-generation sequencing.
Suljič A; Zorec TM; Zakotnik S; Vlaj D; Kogoj R; Knap N; Petrovec M; Poljak M; Avšič-Županc T; Korva M
Brief Bioinform; 2024 May; 25(4):. PubMed ID: 38833323
[TBL] [Abstract][Full Text] [Related]
12. ViralFlow: A Versatile Automated Workflow for SARS-CoV-2 Genome Assembly, Lineage Assignment, Mutations and Intrahost Variant Detection.
Dezordi FZ; Neto AMDS; Campos TL; Jeronimo PMC; Aksenen CF; Almeida SP; Wallau GL; On Behalf Of The Fiocruz Covid-Genomic Surveillance Network
Viruses; 2022 Jan; 14(2):. PubMed ID: 35215811
[TBL] [Abstract][Full Text] [Related]
13. Genomic monitoring unveil the early detection of the SARS-CoV-2 B.1.351 (beta) variant (20H/501Y.V2) in Brazil.
Slavov SN; Patané JSL; Bezerra RDS; Giovanetti M; Fonseca V; Martins AJ; Viala VL; Rodrigues ES; Santos EV; Barros CRS; Marqueze EC; Santos B; Aburjaile F; Neto RM; Moretti DB; Haddad R; Calado RT; Kitajima JP; Freitas E; Schlesinger D; Junior de Alcantara LC; Elias MC; Sampaio SC; Kashima S; Covas DT
J Med Virol; 2021 Dec; 93(12):6782-6787. PubMed ID: 34241897
[TBL] [Abstract][Full Text] [Related]
14. Identification of a High-Frequency Intrahost SARS-CoV-2 Spike Variant with Enhanced Cytopathic and Fusogenic Effects.
Rocheleau L; Laroche G; Fu K; Stewart CM; Mohamud AO; Côté M; Giguère PM; Langlois MA; Pelchat M
mBio; 2021 Jun; 12(3):e0078821. PubMed ID: 34182784
[TBL] [Abstract][Full Text] [Related]
15. Specific allelic discrimination of N501Y and other SARS-CoV-2 mutations by ddPCR detects B.1.1.7 lineage in Washington State.
Perchetti GA; Zhu H; Mills MG; Shrestha L; Wagner C; Bakhash SM; Lin MJ; Xie H; Huang ML; Mathias P; Bedford T; Jerome KR; Greninger AL; Roychoudhury P
J Med Virol; 2021 Oct; 93(10):5931-5941. PubMed ID: 34170525
[TBL] [Abstract][Full Text] [Related]
16. Mutation-Specific SARS-CoV-2 PCR Screen: Rapid and Accurate Detection of Variants of Concern and the Identification of a Newly Emerging Variant with Spike L452R Mutation.
Wang H; Jean S; Eltringham R; Madison J; Snyder P; Tu H; Jones DM; Leber AL
J Clin Microbiol; 2021 Jul; 59(8):e0092621. PubMed ID: 34011523
[TBL] [Abstract][Full Text] [Related]
17. Surveillance of SARS-CoV-2 variants of concern by identification of single nucleotide polymorphisms in the spike protein by a multiplex real-time PCR.
Gomes L; Jeewandara C; Jayadas TP; Dissanayake O; Harvie M; Guruge D; Withanage V; Mahesh PKB; Rajapakse W; Ramachandran R; Dharmarajan V; Pathiraja I; Sanjeewani A; Bandara P; Nanayakkara G; Francis VR; Kithsiri A; Edirisinghe DA; De Silva K; Wijayamuni R; Ogg GS; Waggoner J; Malavige GN
J Virol Methods; 2022 Feb; 300():114374. PubMed ID: 34822912
[TBL] [Abstract][Full Text] [Related]
18. A Novel Strategy for the Detection of SARS-CoV-2 Variants Based on Multiplex PCR-Mass Spectrometry Minisequencing Technology.
Zhao F; Lu J; Lu B; Qin T; Wang X; Hou X; Meng F; Xu X; Li T; Zhou H; Zhang J; Kan B; Huang Y; Zhang Z; Xiao D
Microbiol Spectr; 2021 Dec; 9(3):e0126721. PubMed ID: 34787499
[TBL] [Abstract][Full Text] [Related]
19. SARS-CoV-2 shedding dynamics and transmission in immunosuppressed patients.
Lee JS; Yun KW; Jeong H; Kim B; Kim MJ; Park JH; Shin HS; Oh HS; Sung H; Song MG; Cho SI; Kim SY; Kang CK; Choe PG; Park WB; Kim NJ; Oh MD; Choi EH; Park S; Kim TS; Lee JH; Sung H; Park SS; Seong MW
Virulence; 2022 Dec; 13(1):1242-1251. PubMed ID: 35891618
[TBL] [Abstract][Full Text] [Related]
20. Accessible and Adaptable Multiplexed Real-Time PCR Approaches to Identify SARS-CoV-2 Variants of Concern.
Yan T; Xu Y; Zheng R; Zeng X; Chen Z; Lin S; Xia Z; Liao Y; Zhang Y; Li Q
Microbiol Spectr; 2022 Oct; 10(5):e0322222. PubMed ID: 36106882
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]