BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

208 related articles for article (PubMed ID: 36303018)

  • 1. A framework for detecting noncoding rare-variant associations of large-scale whole-genome sequencing studies.
    Li Z; Li X; Zhou H; Gaynor SM; Selvaraj MS; Arapoglou T; Quick C; Liu Y; Chen H; Sun R; Dey R; Arnett DK; Auer PL; Bielak LF; Bis JC; Blackwell TW; Blangero J; Boerwinkle E; Bowden DW; Brody JA; Cade BE; Conomos MP; Correa A; Cupples LA; Curran JE; de Vries PS; Duggirala R; Franceschini N; Freedman BI; Göring HHH; Guo X; Kalyani RR; Kooperberg C; Kral BG; Lange LA; Lin BM; Manichaikul A; Manning AK; Martin LW; Mathias RA; Meigs JB; Mitchell BD; Montasser ME; Morrison AC; Naseri T; O'Connell JR; Palmer ND; Peyser PA; Psaty BM; Raffield LM; Redline S; Reiner AP; Reupena MS; Rice KM; Rich SS; Smith JA; Taylor KD; Taub MA; Vasan RS; Weeks DE; Wilson JG; Yanek LR; Zhao W; ; ; Rotter JI; Willer CJ; Natarajan P; Peloso GM; Lin X
    Nat Methods; 2022 Dec; 19(12):1599-1611. PubMed ID: 36303018
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Dynamic incorporation of multiple in silico functional annotations empowers rare variant association analysis of large whole-genome sequencing studies at scale.
    Li X; Li Z; Zhou H; Gaynor SM; Liu Y; Chen H; Sun R; Dey R; Arnett DK; Aslibekyan S; Ballantyne CM; Bielak LF; Blangero J; Boerwinkle E; Bowden DW; Broome JG; Conomos MP; Correa A; Cupples LA; Curran JE; Freedman BI; Guo X; Hindy G; Irvin MR; Kardia SLR; Kathiresan S; Khan AT; Kooperberg CL; Laurie CC; Liu XS; Mahaney MC; Manichaikul AW; Martin LW; Mathias RA; McGarvey ST; Mitchell BD; Montasser ME; Moore JE; Morrison AC; O'Connell JR; Palmer ND; Pampana A; Peralta JM; Peyser PA; Psaty BM; Redline S; Rice KM; Rich SS; Smith JA; Tiwari HK; Tsai MY; Vasan RS; Wang FF; Weeks DE; Weng Z; Wilson JG; Yanek LR; ; ; Neale BM; Sunyaev SR; Abecasis GR; Rotter JI; Willer CJ; Peloso GM; Natarajan P; Lin X
    Nat Genet; 2020 Sep; 52(9):969-983. PubMed ID: 32839606
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Powerful, scalable and resource-efficient meta-analysis of rare variant associations in large whole genome sequencing studies.
    Li X; Quick C; Zhou H; Gaynor SM; Liu Y; Chen H; Selvaraj MS; Sun R; Dey R; Arnett DK; Bielak LF; Bis JC; Blangero J; Boerwinkle E; Bowden DW; Brody JA; Cade BE; Correa A; Cupples LA; Curran JE; de Vries PS; Duggirala R; Freedman BI; Göring HHH; Guo X; Haessler J; Kalyani RR; Kooperberg C; Kral BG; Lange LA; Manichaikul A; Martin LW; McGarvey ST; Mitchell BD; Montasser ME; Morrison AC; Naseri T; O'Connell JR; Palmer ND; Peyser PA; Psaty BM; Raffield LM; Redline S; Reiner AP; Reupena MS; Rice KM; Rich SS; Sitlani CM; Smith JA; Taylor KD; Vasan RS; Willer CJ; Wilson JG; Yanek LR; Zhao W; ; Rotter JI; Natarajan P; Peloso GM; Li Z; Lin X
    Nat Genet; 2023 Jan; 55(1):154-164. PubMed ID: 36564505
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Rare variants in long non-coding RNAs are associated with blood lipid levels in the TOPMed whole-genome sequencing study.
    Wang Y; Selvaraj MS; Li X; Li Z; Holdcraft JA; Arnett DK; Bis JC; Blangero J; Boerwinkle E; Bowden DW; Cade BE; Carlson JC; Carson AP; Chen YI; Curran JE; de Vries PS; Dutcher SK; Ellinor PT; Floyd JS; Fornage M; Freedman BI; Gabriel S; Germer S; Gibbs RA; Guo X; He J; Heard-Costa N; Hildalgo B; Hou L; Irvin MR; Joehanes R; Kaplan RC; Kardia SL; Kelly TN; Kim R; Kooperberg C; Kral BG; Levy D; Li C; Liu C; Lloyd-Jone D; Loos RJ; Mahaney MC; Martin LW; Mathias RA; Minster RL; Mitchell BD; Montasser ME; Morrison AC; Murabito JM; Naseri T; O'Connell JR; Palmer ND; Preuss MH; Psaty BM; Raffield LM; Rao DC; Redline S; Reiner AP; Rich SS; Ruepena MS; Sheu WH; Smith JA; Smith A; Tiwari HK; Tsai MY; Viaud-Martinez KA; Wang Z; Yanek LR; Zhao W; ; Rotter JI; Lin X; Natarajan P; Peloso GM
    Am J Hum Genet; 2023 Oct; 110(10):1704-1717. PubMed ID: 37802043
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Dynamic Scan Procedure for Detecting Rare-Variant Association Regions in Whole-Genome Sequencing Studies.
    Li Z; Li X; Liu Y; Shen J; Chen H; Zhou H; Morrison AC; Boerwinkle E; Lin X
    Am J Hum Genet; 2019 May; 104(5):802-814. PubMed ID: 30982610
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A statistical framework for powerful multi-trait rare variant analysis in large-scale whole-genome sequencing studies.
    Li X; Chen H; Selvaraj MS; Van Buren E; Zhou H; Wang Y; Sun R; McCaw ZR; Yu Z; Arnett DK; Bis JC; Blangero J; Boerwinkle E; Bowden DW; Brody JA; Cade BE; Carson AP; Carlson JC; Chami N; Chen YI; Curran JE; de Vries PS; Fornage M; Franceschini N; Freedman BI; Gu C; Heard-Costa NL; He J; Hou L; Hung YJ; Irvin MR; Kaplan RC; Kardia SLR; Kelly T; Konigsberg I; Kooperberg C; Kral BG; Li C; Loos RJF; Mahaney MC; Martin LW; Mathias RA; Minster RL; Mitchell BD; Montasser ME; Morrison AC; Palmer ND; Peyser PA; Psaty BM; Raffield LM; Redline S; Reiner AP; Rich SS; Sitlani CM; Smith JA; Taylor KD; Tiwari H; Vasan RS; Wang Z; Yanek LR; Yu B; ; Rice KM; Rotter JI; Peloso GM; Natarajan P; Li Z; Liu Z; Lin X
    bioRxiv; 2023 Nov; ():. PubMed ID: 37961350
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Use of >100,000 NHLBI Trans-Omics for Precision Medicine (TOPMed) Consortium whole genome sequences improves imputation quality and detection of rare variant associations in admixed African and Hispanic/Latino populations.
    Kowalski MH; Qian H; Hou Z; Rosen JD; Tapia AL; Shan Y; Jain D; Argos M; Arnett DK; Avery C; Barnes KC; Becker LC; Bien SA; Bis JC; Blangero J; Boerwinkle E; Bowden DW; Buyske S; Cai J; Cho MH; Choi SH; Choquet H; Cupples LA; Cushman M; Daya M; de Vries PS; Ellinor PT; Faraday N; Fornage M; Gabriel S; Ganesh SK; Graff M; Gupta N; He J; Heckbert SR; Hidalgo B; Hodonsky CJ; Irvin MR; Johnson AD; Jorgenson E; Kaplan R; Kardia SLR; Kelly TN; Kooperberg C; Lasky-Su JA; Loos RJF; Lubitz SA; Mathias RA; McHugh CP; Montgomery C; Moon JY; Morrison AC; Palmer ND; Pankratz N; Papanicolaou GJ; Peralta JM; Peyser PA; Rich SS; Rotter JI; Silverman EK; Smith JA; Smith NL; Taylor KD; Thornton TA; Tiwari HK; Tracy RP; Wang T; Weiss ST; Weng LC; Wiggins KL; Wilson JG; Yanek LR; Zöllner S; North KE; Auer PL; ; ; Raffield LM; Reiner AP; Li Y
    PLoS Genet; 2019 Dec; 15(12):e1008500. PubMed ID: 31869403
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Efficient Variant Set Mixed Model Association Tests for Continuous and Binary Traits in Large-Scale Whole-Genome Sequencing Studies.
    Chen H; Huffman JE; Brody JA; Wang C; Lee S; Li Z; Gogarten SM; Sofer T; Bielak LF; Bis JC; Blangero J; Bowler RP; Cade BE; Cho MH; Correa A; Curran JE; de Vries PS; Glahn DC; Guo X; Johnson AD; Kardia S; Kooperberg C; Lewis JP; Liu X; Mathias RA; Mitchell BD; O'Connell JR; Peyser PA; Post WS; Reiner AP; Rich SS; Rotter JI; Silverman EK; Smith JA; Vasan RS; Wilson JG; Yanek LR; ; ; Redline S; Smith NL; Boerwinkle E; Borecki IB; Cupples LA; Laurie CC; Morrison AC; Rice KM; Lin X
    Am J Hum Genet; 2019 Feb; 104(2):260-274. PubMed ID: 30639324
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole-Genome Sequencing Association Analyses of Stroke and Its Subtypes in Ancestrally Diverse Populations From Trans-Omics for Precision Medicine Project.
    Hu Y; Haessler JW; Manansala R; Wiggins KL; Moscati A; Beiser A; Heard-Costa NL; Sarnowski C; Raffield LM; Chung J; Marini S; Anderson CD; Rosand J; Xu H; Sun X; Kelly TN; Wong Q; Lange LA; Rotter JI; Correa A; Vasan RS; Seshadri S; Rich SS; Do R; Loos RJF; Longstreth WT; Bis JC; Psaty BM; Tirschwell DL; Assimes TL; Silver B; Liu S; Jackson R; Wassertheil-Smoller S; Mitchell BD; Fornage M; Auer PL; Reiner AP; Kooperberg C;
    Stroke; 2022 Mar; 53(3):875-885. PubMed ID: 34727735
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Identification of putative causal loci in whole-genome sequencing data via knockoff statistics.
    He Z; Liu L; Wang C; Le Guen Y; Lee J; Gogarten S; Lu F; Montgomery S; Tang H; Silverman EK; Cho MH; Greicius M; Ionita-Laza I
    Nat Commun; 2021 May; 12(1):3152. PubMed ID: 34035245
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Rare variants in long non-coding RNAs are associated with blood lipid levels in the TOPMed Whole Genome Sequencing Study.
    Wang Y; Selvaraj MS; Li X; Li Z; Holdcraft JA; Arnett DK; Bis JC; Blangero J; Boerwinkle E; Bowden DW; Cade BE; Carlson JC; Carson AP; Chen YI; Curran JE; de Vries PS; Dutcher SK; Ellinor PT; Floyd JS; Fornage M; Freedman BI; Gabriel S; Germer S; Gibbs RA; Guo X; He J; Heard-Costa N; Hildalgo B; Hou L; Irvin MR; Joehanes R; Kaplan RC; Kardia SL; Kelly TN; Kim R; Kooperberg C; Kral BG; Levy D; Li C; Liu C; Lloyd-Jone D; Loos RJ; Mahaney MC; Martin LW; Mathias RA; Minster RL; Mitchell BD; Montasser ME; Morrison AC; Murabito JM; Naseri T; O'Connell JR; Palmer ND; Preuss MH; Psaty BM; Raffield LM; Rao DC; Redline S; Reiner AP; Rich SS; Ruepena MS; Sheu WH; Smith JA; Smith A; Tiwari HK; Tsai MY; Viaud-Martinez KA; Wang Z; Yanek LR; Zhao W; ; Rotter JI; Lin X; Natarajan P; Peloso GM
    medRxiv; 2023 Jun; ():. PubMed ID: 37425772
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Whole genome sequencing based analysis of inflammation biomarkers in the Trans-Omics for Precision Medicine (TOPMed) consortium.
    Jiang MZ; Gaynor SM; Li X; Van Buren E; Stilp A; Buth E; Wang FF; Manansala R; Gogarten SM; Li Z; Polfus LM; Salimi S; Bis JC; Pankratz N; Yanek LR; Durda P; Tracy RP; Rich SS; Rotter JI; Mitchell BD; Lewis JP; Psaty BM; Pratte KA; Silverman EK; Kaplan RC; Avery C; North KE; Mathias RA; Faraday N; Lin H; Wang B; Carson AP; Norwood AF; Gibbs RA; Kooperberg C; Lundin J; Peters U; Dupuis J; Hou L; Fornage M; Benjamin EJ; Reiner AP; Bowler RP; Lin X; Auer PL; Raffield LM;
    Hum Mol Genet; 2024 May; ():. PubMed ID: 38747556
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Pleiotropy informed adaptive association test of multiple traits using genome-wide association study summary data.
    Masotti M; Guo B; Wu B
    Biometrics; 2019 Dec; 75(4):1076-1085. PubMed ID: 31021400
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Whole-genome sequencing in diverse subjects identifies genetic correlates of leukocyte traits: The NHLBI TOPMed program.
    Mikhaylova AV; McHugh CP; Polfus LM; Raffield LM; Boorgula MP; Blackwell TW; Brody JA; Broome J; Chami N; Chen MH; Conomos MP; Cox C; Curran JE; Daya M; Ekunwe L; Glahn DC; Heard-Costa N; Highland HM; Hobbs BD; Ilboudo Y; Jain D; Lange LA; Miller-Fleming TW; Min N; Moon JY; Preuss MH; Rosen J; Ryan K; Smith AV; Sun Q; Surendran P; de Vries PS; Walter K; Wang Z; Wheeler M; Yanek LR; Zhong X; Abecasis GR; Almasy L; Barnes KC; Beaty TH; Becker LC; Blangero J; Boerwinkle E; Butterworth AS; Chavan S; Cho MH; Choquet H; Correa A; Cox N; DeMeo DL; Faraday N; Fornage M; Gerszten RE; Hou L; Johnson AD; Jorgenson E; Kaplan R; Kooperberg C; Kundu K; Laurie CA; Lettre G; Lewis JP; Li B; Li Y; Lloyd-Jones DM; Loos RJF; Manichaikul A; Meyers DA; Mitchell BD; Morrison AC; Ngo D; Nickerson DA; Nongmaithem S; North KE; O'Connell JR; Ortega VE; Pankratz N; Perry JA; Psaty BM; Rich SS; Soranzo N; Rotter JI; Silverman EK; Smith NL; Tang H; Tracy RP; Thornton TA; Vasan RS; Zein J; Mathias RA; ; Reiner AP; Auer PL
    Am J Hum Genet; 2021 Oct; 108(10):1836-1851. PubMed ID: 34582791
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Whole-genome sequencing association analysis of quantitative red blood cell phenotypes: The NHLBI TOPMed program.
    Hu Y; Stilp AM; McHugh CP; Rao S; Jain D; Zheng X; Lane J; Méric de Bellefon S; Raffield LM; Chen MH; Yanek LR; Wheeler M; Yao Y; Ren C; Broome J; Moon JY; de Vries PS; Hobbs BD; Sun Q; Surendran P; Brody JA; Blackwell TW; Choquet H; Ryan K; Duggirala R; Heard-Costa N; Wang Z; Chami N; Preuss MH; Min N; Ekunwe L; Lange LA; Cushman M; Faraday N; Curran JE; Almasy L; Kundu K; Smith AV; Gabriel S; Rotter JI; Fornage M; Lloyd-Jones DM; Vasan RS; Smith NL; North KE; Boerwinkle E; Becker LC; Lewis JP; Abecasis GR; Hou L; O'Connell JR; Morrison AC; Beaty TH; Kaplan R; Correa A; Blangero J; Jorgenson E; Psaty BM; Kooperberg C; Walton RT; Kleinstiver BP; Tang H; Loos RJF; Soranzo N; Butterworth AS; Nickerson D; Rich SS; Mitchell BD; Johnson AD; Auer PL; Li Y; Mathias RA; Lettre G; Pankratz N; Laurie CC; Laurie CA; Bauer DE; Conomos MP; Reiner AP;
    Am J Hum Genet; 2021 May; 108(5):874-893. PubMed ID: 33887194
    [TBL] [Abstract][Full Text] [Related]  

  • 16. eSCAN: scan regulatory regions for aggregate association testing using whole-genome sequencing data.
    Yang Y; Sun Q; Huang L; Broome JG; Correa A; Reiner A; ; Raffield LM; Yang Y; Li Y
    Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34882196
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Whole-genome association analyses of sleep-disordered breathing phenotypes in the NHLBI TOPMed program.
    Cade BE; Lee J; Sofer T; Wang H; Zhang M; Chen H; Gharib SA; Gottlieb DJ; Guo X; Lane JM; Liang J; Lin X; Mei H; Patel SR; Purcell SM; Saxena R; Shah NA; Evans DS; Hanis CL; Hillman DR; Mukherjee S; Palmer LJ; Stone KL; Tranah GJ; ; Abecasis GR; Boerwinkle EA; Correa A; Cupples LA; Kaplan RC; Nickerson DA; North KE; Psaty BM; Rotter JI; Rich SS; Tracy RP; Vasan RS; Wilson JG; Zhu X; Redline S;
    Genome Med; 2021 Aug; 13(1):136. PubMed ID: 34446064
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A genome-wide scan statistic framework for whole-genome sequence data analysis.
    He Z; Xu B; Buxbaum J; Ionita-Laza I
    Nat Commun; 2019 Jul; 10(1):3018. PubMed ID: 31289270
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Unified Sequence-Based Association Tests Allowing for Multiple Functional Annotations and Meta-analysis of Noncoding Variation in Metabochip Data.
    He Z; Xu B; Lee S; Ionita-Laza I
    Am J Hum Genet; 2017 Sep; 101(3):340-352. PubMed ID: 28844485
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Identification of novel and rare variants associated with handgrip strength using whole genome sequence data from the NHLBI Trans-Omics in Precision Medicine (TOPMed) Program.
    Sarnowski C; Chen H; Biggs ML; Wassertheil-Smoller S; Bressler J; Irvin MR; Ryan KA; Karasik D; Arnett DK; Cupples LA; Fardo DW; Gogarten SM; Heavner BD; Jain D; Kang HM; Kooperberg C; Mainous AG; Mitchell BD; Morrison AC; O'Connell JR; Psaty BM; Rice K; Smith AV; Vasan RS; Windham BG; Kiel DP; Murabito JM; Lunetta KL; ;
    PLoS One; 2021; 16(7):e0253611. PubMed ID: 34214102
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.