177 related articles for article (PubMed ID: 36328151)
1. PlantCADB: A Comprehensive Plant Chromatin Accessibility Database.
Ding K; Sun S; Luo Y; Long C; Zhai J; Zhai Y; Wang G
Genomics Proteomics Bioinformatics; 2023 Apr; 21(2):311-323. PubMed ID: 36328151
[TBL] [Abstract][Full Text] [Related]
2. ATACdb: a comprehensive human chromatin accessibility database.
Wang F; Bai X; Wang Y; Jiang Y; Ai B; Zhang Y; Liu Y; Xu M; Wang Q; Han X; Pan Q; Li Y; Li X; Zhang J; Zhao J; Zhang G; Feng C; Zhu J; Li C
Nucleic Acids Res; 2021 Jan; 49(D1):D55-D64. PubMed ID: 33125076
[TBL] [Abstract][Full Text] [Related]
3. Identification of the accessible chromatin regions in six tissues in the soybean.
Huang M; Zhang L; Zhou L; Yung WS; Wang Z; Xiao Z; Wang Q; Wang X; Li MW; Lam HM
Genomics; 2022 May; 114(3):110364. PubMed ID: 35421559
[TBL] [Abstract][Full Text] [Related]
4. Chicken chromatin accessibility atlas accelerates epigenetic annotation of birds and gene fine-mapping associated with growth traits.
Zhu XN; Wang YZ; Li C; Wu HY; Zhang R; Hu XX
Zool Res; 2023 Jan; 44(1):53-62. PubMed ID: 36317479
[TBL] [Abstract][Full Text] [Related]
5. ChromLoops: a comprehensive database for specific protein-mediated chromatin loops in diverse organisms.
Zhou Q; Cheng S; Zheng S; Wang Z; Guan P; Zhu Z; Huang X; Zhou C; Li G
Nucleic Acids Res; 2023 Jan; 51(D1):D57-D69. PubMed ID: 36243984
[TBL] [Abstract][Full Text] [Related]
6. Integrated Analysis of Transcriptome, microRNAs, and Chromatin Accessibility Revealed Potential Early B-Cell Factor1-Regulated Transcriptional Networks during the Early Development of Fetal Brown Adipose Tissues in Rabbits.
Du K; Shi Y; Bai X; Chen L; Sun W; Chen S; Wang J; Jia X; Lai S
Cells; 2022 Aug; 11(17):. PubMed ID: 36078081
[TBL] [Abstract][Full Text] [Related]
7. Chromatin accessibility illuminates single-cell regulatory dynamics of rice root tips.
Feng D; Liang Z; Wang Y; Yao J; Yuan Z; Hu G; Qu R; Xie S; Li D; Yang L; Zhao X; Ma Y; Lohmann JU; Gu X
BMC Biol; 2022 Dec; 20(1):274. PubMed ID: 36482454
[TBL] [Abstract][Full Text] [Related]
8. Enhancement of Plant Productivity in the Post-Genomics Era.
Thao NP; Tran LS
Curr Genomics; 2016 Aug; 17(4):295-6. PubMed ID: 27499678
[TBL] [Abstract][Full Text] [Related]
9. Developing OCHROdb, a comprehensive quality checked database of open chromatin regions from sequencing data.
Shooshtari P; Feng S; Nelakuditi V; Asakereh R; Hosseini Naghavi N; Foong J; Brudno M; Cotsapas C
Sci Rep; 2023 May; 13(1):8106. PubMed ID: 37202401
[TBL] [Abstract][Full Text] [Related]
10. Assessing the regulatory potential of transposable elements using chromatin accessibility profiles of maize transposons.
Noshay JM; Marand AP; Anderson SN; Zhou P; Mejia Guerra MK; Lu Z; O'Connor CH; Crisp PA; Hirsch CN; Schmitz RJ; Springer NM
Genetics; 2021 Mar; 217(1):1-13. PubMed ID: 33683350
[TBL] [Abstract][Full Text] [Related]
11. CATA: a comprehensive chromatin accessibility database for cancer.
Zhou J; Li Y; Cao H; Yang M; Chu L; Li T; Yu Z; Yu R; Qiu B; Wang Q; Li X; Xie J
Database (Oxford); 2020 Jan; 2022():. PubMed ID: 35134148
[TBL] [Abstract][Full Text] [Related]
12. Characterization of Transposon-Derived Accessible Chromatin Regions in Rice (
Zhang A; Zhang W
Int J Mol Sci; 2022 Aug; 23(16):. PubMed ID: 36012213
[TBL] [Abstract][Full Text] [Related]
13. Chromatin accessibility prediction via a hybrid deep convolutional neural network.
Liu Q; Xia F; Yin Q; Jiang R
Bioinformatics; 2018 Mar; 34(5):732-738. PubMed ID: 29069282
[TBL] [Abstract][Full Text] [Related]
14. Integrating ATAC-seq and RNA-seq Reveals the Dynamics of Chromatin Accessibility and Gene Expression in Apple Response to Drought.
Wang S; He J; Deng M; Wang C; Wang R; Yan J; Luo M; Ma F; Guan Q; Xu J
Int J Mol Sci; 2022 Sep; 23(19):. PubMed ID: 36232500
[TBL] [Abstract][Full Text] [Related]
15. Systematic analysis of the effects of genetic variants on chromatin accessibility to decipher functional variants in non-coding regions.
Wang D; Wu X; Jiang G; Yang J; Yu Z; Yang Y; Yang W; Niu X; Tang K; Gong J
Front Oncol; 2022; 12():1035855. PubMed ID: 36330496
[TBL] [Abstract][Full Text] [Related]
16. OpenAnnotate: a web server to annotate the chromatin accessibility of genomic regions.
Chen S; Liu Q; Cui X; Feng Z; Li C; Wang X; Zhang X; Wang Y; Jiang R
Nucleic Acids Res; 2021 Jul; 49(W1):W483-W490. PubMed ID: 33999180
[TBL] [Abstract][Full Text] [Related]
17. Constructing tissue-specific transcriptional regulatory networks via a Markov random field.
Ma S; Jiang T; Jiang R
BMC Genomics; 2018 Dec; 19(Suppl 10):884. PubMed ID: 30598101
[TBL] [Abstract][Full Text] [Related]
18. Integrative analysis of histopathological images and chromatin accessibility data for estrogen receptor-positive breast cancer.
Xu S; Lu Z; Shao W; Yu CY; Reiter JL; Feng Q; Feng W; Huang K; Liu Y
BMC Med Genomics; 2020 Dec; 13(Suppl 11):195. PubMed ID: 33371906
[TBL] [Abstract][Full Text] [Related]
19. EmAtlas: a comprehensive atlas for exploring spatiotemporal activation in mammalian embryogenesis.
Zheng L; Liang P; Long C; Li H; Li H; Liang Y; He X; Xi Q; Xing Y; Zuo Y
Nucleic Acids Res; 2023 Jan; 51(D1):D924-D932. PubMed ID: 36189903
[TBL] [Abstract][Full Text] [Related]
20. PI3K signaling specifies proximal-distal fate by driving a developmental gene regulatory network in SOX9+ mouse lung progenitors.
Khattar D; Fernandes S; Snowball J; Guo M; Gillen MC; Jain SS; Sinner D; Zacharias W; Swarr DT
Elife; 2022 Aug; 11():. PubMed ID: 35976093
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]