These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

124 related articles for article (PubMed ID: 36343484)

  • 1. Multiple Sequence Alignment based on deep Q network with negative feedback policy.
    Zhang Y; Zhang Q; Liu Y; Lin M; Ding C
    Comput Biol Chem; 2022 Dec; 101():107780. PubMed ID: 36343484
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Multiple sequence alignment based on deep reinforcement learning with self-attention and positional encoding.
    Liu Y; Yuan H; Zhang Q; Wang Z; Xiong S; Wen N; Zhang Y
    Bioinformatics; 2023 Nov; 39(11):. PubMed ID: 37856335
    [TBL] [Abstract][Full Text] [Related]  

  • 3. TPMA: A two pointers meta-alignment tool to ensemble different multiple nucleic acid sequence alignments.
    Zhai Y; Chao J; Wang Y; Zhang P; Tang F; Zou Q
    PLoS Comput Biol; 2024 Apr; 20(4):e1011988. PubMed ID: 38557416
    [TBL] [Abstract][Full Text] [Related]  

  • 4. WMSA: a novel method for multiple sequence alignment of DNA sequences.
    Wei Y; Zou Q; Tang F; Yu L
    Bioinformatics; 2022 Nov; 38(22):5019-5025. PubMed ID: 36179076
    [TBL] [Abstract][Full Text] [Related]  

  • 5. M2Align: parallel multiple sequence alignment with a multi-objective metaheuristic.
    Zambrano-Vega C; Nebro AJ; García-Nieto J; Aldana-Montes JF
    Bioinformatics; 2017 Oct; 33(19):3011-3017. PubMed ID: 28541404
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CMSA: a heterogeneous CPU/GPU computing system for multiple similar RNA/DNA sequence alignment.
    Chen X; Wang C; Tang S; Yu C; Zou Q
    BMC Bioinformatics; 2017 Jun; 18(1):315. PubMed ID: 28646874
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Protein multiple sequence alignment by hybrid bio-inspired algorithms.
    Cutello V; Nicosia G; Pavone M; Prizzi I
    Nucleic Acids Res; 2011 Mar; 39(6):1980-92. PubMed ID: 21071394
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A novel fast multiple nucleotide sequence alignment method based on FM-index.
    Liu H; Zou Q; Xu Y
    Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34893794
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Assessing the efficiency of multiple sequence alignment programs.
    Pais FS; Ruy PC; Oliveira G; Coimbra RS
    Algorithms Mol Biol; 2014 Mar; 9(1):4. PubMed ID: 24602402
    [TBL] [Abstract][Full Text] [Related]  

  • 10. ProgSIO-MSA: Progressive-based single iterative optimization framework for multiple sequence alignment using an effective scoring system.
    Bankapur S; Patil N
    J Bioinform Comput Biol; 2020 Apr; 18(2):2050005. PubMed ID: 32372711
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Local Alignment of DNA Sequence Based on Deep Reinforcement Learning.
    Song YJ; Cho DH
    IEEE Open J Eng Med Biol; 2021; 2():170-178. PubMed ID: 35402982
    [No Abstract]   [Full Text] [Related]  

  • 12. MAGUS: Multiple sequence Alignment using Graph clUStering.
    Smirnov V; Warnow T
    Bioinformatics; 2021 Jul; 37(12):1666-1672. PubMed ID: 33252662
    [TBL] [Abstract][Full Text] [Related]  

  • 13. FAME: fast and memory efficient multiple sequences alignment tool through compatible chain of roots.
    Naznooshsadat E; Elham P; Ali SZ
    Bioinformatics; 2020 Jun; 36(12):3662-3668. PubMed ID: 32170927
    [TBL] [Abstract][Full Text] [Related]  

  • 14. HAlign: Fast multiple similar DNA/RNA sequence alignment based on the centre star strategy.
    Zou Q; Hu Q; Guo M; Wang G
    Bioinformatics; 2015 Aug; 31(15):2475-81. PubMed ID: 25812743
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A Novel Approach to Multiple Sequence Alignment Using Multiobjective Evolutionary Algorithm Based on Decomposition.
    Zhu H; He Z; Jia Y
    IEEE J Biomed Health Inform; 2016 Mar; 20(2):717-27. PubMed ID: 25700475
    [TBL] [Abstract][Full Text] [Related]  

  • 16. WMSA 2: a multiple DNA/RNA sequence alignment tool implemented with accurate progressive mode and a fast win-win mode combining the center star and progressive strategies.
    Chen J; Chao J; Liu H; Yang F; Zou Q; Tang F
    Brief Bioinform; 2023 Jul; 24(4):. PubMed ID: 37200156
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Sequoya: multiobjective multiple sequence alignment in Python.
    Benítez-Hidalgo A; Nebro AJ; Aldana-Montes JF
    Bioinformatics; 2020 Jun; 36(12):3892-3893. PubMed ID: 32315391
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost.
    Yamada S; Gotoh O; Yamana H
    BMC Bioinformatics; 2006 Dec; 7():524. PubMed ID: 17137519
    [TBL] [Abstract][Full Text] [Related]  

  • 19. UPP2: fast and accurate alignment of datasets with fragmentary sequences.
    Park M; Ivanovic S; Chu G; Shen C; Warnow T
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36625535
    [TBL] [Abstract][Full Text] [Related]  

  • 20. GUIDANCE: a web server for assessing alignment confidence scores.
    Penn O; Privman E; Ashkenazy H; Landan G; Graur D; Pupko T
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W23-8. PubMed ID: 20497997
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.