These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2. Analysis and Visualization of Longitudinal Genomic and Clinical Data from the AACR Project GENIE Biopharma Collaborative in cBioPortal. de Bruijn I; Kundra R; Mastrogiacomo B; Tran TN; Sikina L; Mazor T; Li X; Ochoa A; Zhao G; Lai B; Abeshouse A; Baiceanu D; Ciftci E; Dogrusoz U; Dufilie A; Erkoc Z; Garcia Lara E; Fu Z; Gross B; Haynes C; Heath A; Higgins D; Jagannathan P; Kalletla K; Kumari P; Lindsay J; Lisman A; Leenknegt B; Lukasse P; Madela D; Madupuri R; van Nierop P; Plantalech O; Quach J; Resnick AC; Rodenburg SYA; Satravada BA; Schaeffer F; Sheridan R; Singh J; Sirohi R; Sumer SO; van Hagen S; Wang A; Wilson M; Zhang H; Zhu K; Rusk N; Brown S; Lavery JA; Panageas KS; Rudolph JE; LeNoue-Newton ML; Warner JL; Guo X; Hunter-Zinck H; Yu TV; Pilai S; Nichols C; Gardos SM; Philip J; ; Kehl KL; Riely GJ; Schrag D; Lee J; Fiandalo MV; Sweeney SM; Pugh TJ; Sander C; Cerami E; Gao J; Schultz N Cancer Res; 2023 Dec; 83(23):3861-3867. PubMed ID: 37668528 [TBL] [Abstract][Full Text] [Related]
3. A data processing pipeline for the AACR project GENIE biopharma collaborative data with the {genieBPC} R package. Lavery JA; Brown S; Curry MA; Martin A; Sjoberg DD; Whiting K Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36519837 [TBL] [Abstract][Full Text] [Related]
4. Genomic Characterization and Clinical Outcomes of Patients with Peritoneal Metastases from the AACR GENIE Biopharma Collaborative Colorectal Cancer Registry. Sanz-Garcia E; Brown S; Lavery JA; Weiss J; Fuchs HE; Newcomb A; Postle A; Warner JL; LeNoue-Newton ML; Sweeney SM; Pillai S; Yu C; Nichols C; Mastrogiacomo B; Kundra R; Schultz N; Kehl KL; Riely GJ; Schrag D; Govindarajan A; Panageas KS; Bedard PL Cancer Res Commun; 2024 Feb; 4(2):475-486. PubMed ID: 38329392 [TBL] [Abstract][Full Text] [Related]
5. The Comparison of Newly Diagnosed Invasive Breast Patient Cohorts in Genomics Evidence Neoplasia Information Exchange Biopharma Collaborative (GENIE-BPC) and Other Real-World Databases. Liu X; Alipour GH; Shao C; Burcu M; Bortnichak E; Vo T; Yu CL Pharmacoepidemiol Drug Saf; 2024 Aug; 33(8):e5851. PubMed ID: 39090803 [TBL] [Abstract][Full Text] [Related]
6. A Scalable Quality Assurance Process for Curating Oncology Electronic Health Records: The Project GENIE Biopharma Collaborative Approach. Lavery JA; Lepisto EM; Brown S; Rizvi H; McCarthy C; LeNoue-Newton M; Yu C; Lee J; Guo X; Yu T; Rudolph J; Sweeney S; ; Park BH; Warner JL; Bedard PL; Riely G; Schrag D; Panageas KS JCO Clin Cancer Inform; 2022 Feb; 6():e2100105. PubMed ID: 35192403 [TBL] [Abstract][Full Text] [Related]
7. AACR Project GENIE: 100,000 Cases and Beyond. Pugh TJ; Bell JL; Bruce JP; Doherty GJ; Galvin M; Green MF; Hunter-Zinck H; Kumari P; Lenoue-Newton ML; Li MM; Lindsay J; Mazor T; Ovalle A; Sammut SJ; Schultz N; Yu TV; Sweeney SM; Bernard B; Cancer Discov; 2022 Sep; 12(9):2044-2057. PubMed ID: 35819403 [TBL] [Abstract][Full Text] [Related]
8. American Association for Cancer Research Project Genomics Evidence Neoplasia Information Exchange: From Inception to First Data Release and Beyond-Lessons Learned and Member Institutions' Perspectives. Micheel CM; Sweeney SM; LeNoue-Newton ML; André F; Bedard PL; Guinney J; Meijer GA; Rollins BJ; Sawyers CL; Schultz N; Shaw KRM; Velculescu VE; Levy MA; JCO Clin Cancer Inform; 2018 Dec; 2():1-14. PubMed ID: 30652542 [TBL] [Abstract][Full Text] [Related]
9. AACR releases large cancer genomic data set from project GENIE. Printz C Cancer; 2017 May; 123(10):1685. PubMed ID: 28475245 [No Abstract] [Full Text] [Related]
10. AACR Project GENIE: Powering Precision Medicine through an International Consortium. AACR Project GENIE Consortium Cancer Discov; 2017 Aug; 7(8):818-831. PubMed ID: 28572459 [TBL] [Abstract][Full Text] [Related]
11. The GENIE Is Out of the Bottle: Landmark Cancer Genomics Dataset Released. Litchfield K; Turajlic S; Swanton C Cancer Discov; 2017 Aug; 7(8):796-798. PubMed ID: 28765114 [TBL] [Abstract][Full Text] [Related]
12. Huge Data-Sharing Project Launched. Rose S Cancer Discov; 2016 Jan; 6(1):4-5. PubMed ID: 26546297 [TBL] [Abstract][Full Text] [Related]