These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
184 related articles for article (PubMed ID: 36379716)
21. Improved Apis mellifera reference genome based on the alternative long-read-based assemblies. Kaskinova M; Yunusbayev B; Altinbaev R; Raffiudin R; Carpenter MH; Kwon HW; Nikolenko A; Harpur BA; Yunusbaev U G3 (Bethesda); 2021 Sep; 11(9):. PubMed ID: 34544128 [TBL] [Abstract][Full Text] [Related]
22. A graph-based approach to diploid genome assembly. Garg S; Rautiainen M; Novak AM; Garrison E; Durbin R; Marschall T Bioinformatics; 2018 Jul; 34(13):i105-i114. PubMed ID: 29949989 [TBL] [Abstract][Full Text] [Related]
23. Hapo-G, haplotype-aware polishing of genome assemblies with accurate reads. Aury JM; Istace B NAR Genom Bioinform; 2021 Jun; 3(2):lqab034. PubMed ID: 33987534 [TBL] [Abstract][Full Text] [Related]
24. Assessment of human diploid genome assembly with 10x Linked-Reads data. Zhang L; Zhou X; Weng Z; Sidow A Gigascience; 2019 Nov; 8(11):. PubMed ID: 31769805 [TBL] [Abstract][Full Text] [Related]
25. Localized assembly for long reads enables genome-wide analysis of repetitive regions at single-base resolution in human genomes. Ikemoto K; Fujimoto H; Fujimoto A Hum Genomics; 2023 Mar; 17(1):21. PubMed ID: 36895025 [TBL] [Abstract][Full Text] [Related]
26. Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome. Faino L; Seidl MF; Datema E; van den Berg GC; Janssen A; Wittenberg AH; Thomma BP mBio; 2015 Aug; 6(4):. PubMed ID: 26286689 [TBL] [Abstract][Full Text] [Related]
27. LR_Gapcloser: a tiling path-based gap closer that uses long reads to complete genome assembly. Xu GC; Xu TJ; Zhu R; Zhang Y; Li SQ; Wang HW; Li JT Gigascience; 2019 Jan; 8(1):. PubMed ID: 30576505 [TBL] [Abstract][Full Text] [Related]
28. Assembly of long, error-prone reads using repeat graphs. Kolmogorov M; Yuan J; Lin Y; Pevzner PA Nat Biotechnol; 2019 May; 37(5):540-546. PubMed ID: 30936562 [TBL] [Abstract][Full Text] [Related]
36. SVDSS: structural variation discovery in hard-to-call genomic regions using sample-specific strings from accurate long reads. Denti L; Khorsand P; Bonizzoni P; Hormozdiari F; Chikhi R Nat Methods; 2023 Apr; 20(4):550-558. PubMed ID: 36550274 [TBL] [Abstract][Full Text] [Related]
37. Whole-genome sequencing and assembly with high-throughput, short-read technologies. Sundquist A; Ronaghi M; Tang H; Pevzner P; Batzoglou S PLoS One; 2007 May; 2(5):e484. PubMed ID: 17534434 [TBL] [Abstract][Full Text] [Related]
38. A complete telomere-to-telomere assembly of the maize genome. Chen J; Wang Z; Tan K; Huang W; Shi J; Li T; Hu J; Wang K; Wang C; Xin B; Zhao H; Song W; Hufford MB; Schnable JC; Jin W; Lai J Nat Genet; 2023 Jul; 55(7):1221-1231. PubMed ID: 37322109 [TBL] [Abstract][Full Text] [Related]
39. MaGuS: a tool for quality assessment and scaffolding of genome assemblies with Whole Genome Profiling™ Data. Madoui MA; Dossat C; d'Agata L; van Oeveren J; van der Vossen E; Aury JM BMC Bioinformatics; 2016 Mar; 17():115. PubMed ID: 26936254 [TBL] [Abstract][Full Text] [Related]