BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 36385508)

  • 1. Transcriptome annotation of 17 porcine tissues using nanopore sequencing technology.
    Li J; Guan D; Halstead MM; Islas-Trejo AD; Goszczynski DE; Ernst CW; Cheng H; Ross P; Zhou H
    Anim Genet; 2023 Feb; 54(1):35-44. PubMed ID: 36385508
    [TBL] [Abstract][Full Text] [Related]  

  • 2. A high-quality annotated transcriptome of swine peripheral blood.
    Liu H; Smith TPL; Nonneman DJ; Dekkers JCM; Tuggle CK
    BMC Genomics; 2017 Jun; 18(1):479. PubMed ID: 28646867
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing.
    Guan D; Halstead MM; Islas-Trejo AD; Goszczynski DE; Cheng HH; Ross PJ; Zhou H
    Front Genet; 2022; 13():997460. PubMed ID: 36246588
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology.
    Beiki H; Murdoch BM; Park CA; Kern C; Kontechy D; Becker G; Rincon G; Jiang H; Zhou H; Thorne J; Koltes JE; Michal JJ; Davenport K; Rijnkels M; Ross PJ; Hu R; Corum S; McKay S; Smith TPL; Liu W; Ma W; Zhang X; Xu X; Han X; Jiang Z; Hu ZL; Reecy JM
    Gigascience; 2024 Jan; 13():. PubMed ID: 38626724
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Updated and enhanced pig cardiac transcriptome based on long-read RNA sequencing and proteomics.
    Müller T; Boileau E; Talyan S; Kehr D; Varadi K; Busch M; Most P; Krijgsveld J; Dieterich C
    J Mol Cell Cardiol; 2021 Jan; 150():23-31. PubMed ID: 33049256
    [TBL] [Abstract][Full Text] [Related]  

  • 6. UNAGI: Yeast Transcriptome Reconstruction and Gene Discovery Using Nanopore Sequencing.
    Al Kadi M; Jung N; Okuzaki D
    Methods Mol Biol; 2022; 2477():79-89. PubMed ID: 35524113
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Accurate transcriptome assembly by Nanopore RNA sequencing reveals novel functional transcripts in hepatocellular carcinoma.
    Fang Y; Chen G; Chen F; Hu E; Dong X; Li Z; He L; Sun Y; Qiu L; Xu H; Cai Z; Liu X
    Cancer Sci; 2021 Sep; 112(9):3555-3568. PubMed ID: 34255396
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Illuminating the dark side of the human transcriptome with long read transcript sequencing.
    Kuo RI; Cheng Y; Zhang R; Brown JWS; Smith J; Archibald AL; Burt DW
    BMC Genomics; 2020 Oct; 21(1):751. PubMed ID: 33126848
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Genome-wide identification of tissue-specific long non-coding RNA in three farm animal species.
    Kern C; Wang Y; Chitwood J; Korf I; Delany M; Cheng H; Medrano JF; Van Eenennaam AL; Ernst C; Ross P; Zhou H
    BMC Genomics; 2018 Sep; 19(1):684. PubMed ID: 30227846
    [TBL] [Abstract][Full Text] [Related]  

  • 10. High resolution annotation of zebrafish transcriptome using long-read sequencing.
    Nudelman G; Frasca A; Kent B; Sadler KC; Sealfon SC; Walsh MJ; Zaslavsky E
    Genome Res; 2018 Sep; 28(9):1415-1425. PubMed ID: 30061115
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Improved annotation of the domestic pig genome through integration of Iso-Seq and RNA-seq data.
    Beiki H; Liu H; Huang J; Manchanda N; Nonneman D; Smith TPL; Reecy JM; Tuggle CK
    BMC Genomics; 2019 May; 20(1):344. PubMed ID: 31064321
    [TBL] [Abstract][Full Text] [Related]  

  • 12. PARRoT- a homology-based strategy to quantify and compare RNA-sequencing from non-model organisms.
    Gan RC; Chen TW; Wu TH; Huang PJ; Lee CC; Yeh YM; Chiu CH; Huang HD; Tang P
    BMC Bioinformatics; 2016 Dec; 17(Suppl 19):513. PubMed ID: 28155708
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Knowledge-based reconstruction of mRNA transcripts with short sequencing reads for transcriptome research.
    Seok J; Xu W; Jiang H; Davis RW; Xiao W
    PLoS One; 2012; 7(2):e31440. PubMed ID: 22312447
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Transcriptome profiling of mouse samples using nanopore sequencing of cDNA and RNA molecules.
    Sessegolo C; Cruaud C; Da Silva C; Cologne A; Dubarry M; Derrien T; Lacroix V; Aury JM
    Sci Rep; 2019 Oct; 9(1):14908. PubMed ID: 31624302
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Mining Unknown Porcine Protein Isoforms by Tissue-based Map of Proteome Enhances Pig Genome Annotation.
    Zhao P; Zheng X; Yu Y; Hou Z; Diao C; Wang H; Kang H; Ning C; Li J; Feng W; Wang W; Liu GE; Li B; Smith J; Chamba Y; Liu JF
    Genomics Proteomics Bioinformatics; 2021 Oct; 19(5):772-786. PubMed ID: 33631433
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Full-length transcriptome sequencing reveals extreme incomplete annotation of the goat genome.
    Zhang H; Liang Y; Chen S; Xuan Z; Jiang Y; Li R; Cao Y
    Anim Genet; 2023 Aug; 54(4):421-424. PubMed ID: 36849788
    [TBL] [Abstract][Full Text] [Related]  

  • 17. UNAGI: an automated pipeline for nanopore full-length cDNA sequencing uncovers novel transcripts and isoforms in yeast.
    Al Kadi M; Jung N; Ito S; Kameoka S; Hishida T; Motooka D; Nakamura S; Iida T; Okuzaki D
    Funct Integr Genomics; 2020 Jul; 20(4):523-536. PubMed ID: 31955296
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Depletion of Hemoglobin Transcripts and Long-Read Sequencing Improves the Transcriptome Annotation of the Polar Bear (
    Byrne A; Supple MA; Volden R; Laidre KL; Shapiro B; Vollmers C
    Front Genet; 2019; 10():643. PubMed ID: 31379921
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Large-Scale Multiplexing Permits Full-Length Transcriptome Annotation of 32 Bovine Tissues From a Single Nanopore Flow Cell.
    Halstead MM; Islas-Trejo A; Goszczynski DE; Medrano JF; Zhou H; Ross PJ
    Front Genet; 2021; 12():664260. PubMed ID: 34093657
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Complete characterization of the yak testicular development using accurate full-length transcriptome sequencing.
    Wang X; Guo S; Xiong L; Wu X; Bao P; Kang Y; Cao M; Ding Z; Liang C; Pei J; Guo X
    Int J Biol Macromol; 2024 Jun; 271(Pt 1):132400. PubMed ID: 38759851
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.