127 related articles for article (PubMed ID: 36388153)
41. MetaFast: fast reference-free graph-based comparison of shotgun metagenomic data.
Ulyantsev VI; Kazakov SV; Dubinkina VB; Tyakht AV; Alexeev DG
Bioinformatics; 2016 Sep; 32(18):2760-7. PubMed ID: 27259541
[TBL] [Abstract][Full Text] [Related]
42. ViralMSA: massively scalable reference-guided multiple sequence alignment of viral genomes.
Moshiri N
Bioinformatics; 2021 May; 37(5):714-716. PubMed ID: 32814953
[TBL] [Abstract][Full Text] [Related]
43. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
Alkan F; Erten C
Bioinformatics; 2015 Jul; 31(14):2356-63. PubMed ID: 25788620
[TBL] [Abstract][Full Text] [Related]
44. DeepSF: deep convolutional neural network for mapping protein sequences to folds.
Hou J; Adhikari B; Cheng J
Bioinformatics; 2018 Apr; 34(8):1295-1303. PubMed ID: 29228193
[TBL] [Abstract][Full Text] [Related]
45. The Amordad database engine for metagenomics.
Behnam E; Smith AD
Bioinformatics; 2014 Oct; 30(20):2949-55. PubMed ID: 24974201
[TBL] [Abstract][Full Text] [Related]
46. Faster sequence homology searches by clustering subsequences.
Suzuki S; Kakuta M; Ishida T; Akiyama Y
Bioinformatics; 2015 Apr; 31(8):1183-90. PubMed ID: 25432166
[TBL] [Abstract][Full Text] [Related]
47. Filtering duplicate reads from 454 pyrosequencing data.
Balzer S; Malde K; Grohme MA; Jonassen I
Bioinformatics; 2013 Apr; 29(7):830-6. PubMed ID: 23376350
[TBL] [Abstract][Full Text] [Related]
48. Metavir: a web server dedicated to virome analysis.
Roux S; Faubladier M; Mahul A; Paulhe N; Bernard A; Debroas D; Enault F
Bioinformatics; 2011 Nov; 27(21):3074-5. PubMed ID: 21911332
[TBL] [Abstract][Full Text] [Related]
49. GraphCrunch 2: Software tool for network modeling, alignment and clustering.
Kuchaiev O; Stevanović A; Hayes W; Pržulj N
BMC Bioinformatics; 2011 Jan; 12():24. PubMed ID: 21244715
[TBL] [Abstract][Full Text] [Related]
50. MGAviewer: a desktop visualization tool for analysis of metagenomics alignment data.
Zhu Z; Niu B; Chen J; Wu S; Sun S; Li W
Bioinformatics; 2013 Jan; 29(1):122-3. PubMed ID: 23044549
[TBL] [Abstract][Full Text] [Related]
51. SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data.
Silva GG; Green KT; Dutilh BE; Edwards RA
Bioinformatics; 2016 Feb; 32(3):354-61. PubMed ID: 26454280
[TBL] [Abstract][Full Text] [Related]
52. IDMIL: an alignment-free Interpretable Deep Multiple Instance Learning (MIL) for predicting disease from whole-metagenomic data.
Rahman MA; Rangwala H
Bioinformatics; 2020 Jul; 36(Suppl_1):i39-i47. PubMed ID: 32657370
[TBL] [Abstract][Full Text] [Related]
53. IGLOSS: iterative gapless local similarity search.
Rabar B; Zagorščak M; Ristov S; Rosenzweig M; Goldstein P
Bioinformatics; 2019 Sep; 35(18):3491-3492. PubMed ID: 30721953
[TBL] [Abstract][Full Text] [Related]
54. BitPAl: a bit-parallel, general integer-scoring sequence alignment algorithm.
Loving J; Hernandez Y; Benson G
Bioinformatics; 2014 Nov; 30(22):3166-73. PubMed ID: 25075119
[TBL] [Abstract][Full Text] [Related]
55. ESPRIT: estimating species richness using large collections of 16S rRNA pyrosequences.
Sun Y; Cai Y; Liu L; Yu F; Farrell ML; McKendree W; Farmerie W
Nucleic Acids Res; 2009 Jun; 37(10):e76. PubMed ID: 19417062
[TBL] [Abstract][Full Text] [Related]
56. Large-scale 16S gene assembly using metagenomics shotgun sequences.
Zeng F; Wang Z; Wang Y; Zhou J; Chen T
Bioinformatics; 2017 May; 33(10):1447-1456. PubMed ID: 28158392
[TBL] [Abstract][Full Text] [Related]
57. Hammock: a hidden Markov model-based peptide clustering algorithm to identify protein-interaction consensus motifs in large datasets.
Krejci A; Hupp TR; Lexa M; Vojtesek B; Muller P
Bioinformatics; 2016 Jan; 32(1):9-16. PubMed ID: 26342231
[TBL] [Abstract][Full Text] [Related]
58. MoDMaps3D: an interactive webtool for the quantification and 3D visualization of interrelationships in a dataset of DNA sequences.
Karamichalis R; Kari L
Bioinformatics; 2017 Oct; 33(19):3091-3093. PubMed ID: 28605460
[TBL] [Abstract][Full Text] [Related]
59. Parallelization of MAFFT for large-scale multiple sequence alignments.
Nakamura T; Yamada KD; Tomii K; Katoh K
Bioinformatics; 2018 Jul; 34(14):2490-2492. PubMed ID: 29506019
[TBL] [Abstract][Full Text] [Related]
60. SVM-Fold: a tool for discriminative multi-class protein fold and superfamily recognition.
Melvin I; Ie E; Kuang R; Weston J; Stafford WN; Leslie C
BMC Bioinformatics; 2007 May; 8 Suppl 4(Suppl 4):S2. PubMed ID: 17570145
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
