These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

110 related articles for article (PubMed ID: 36397524)

  • 21. Simulating microbial systems: addressing model uncertainty/incompleteness via multiscale and entropy methods.
    Singharoy A; Joshi H; Cheluvaraja S; Miao Y; Brown D; Ortoleva P
    Methods Mol Biol; 2012; 881():433-67. PubMed ID: 22639222
    [TBL] [Abstract][Full Text] [Related]  

  • 22. The multiscale coarse-graining method. XI. Accurate interactions based on the centers of charge of coarse-grained sites.
    Cao Z; Voth GA
    J Chem Phys; 2015 Dec; 143(24):243116. PubMed ID: 26723601
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Coarse-Graining of TIP4P/2005, TIP4P-Ew, SPC/E, and TIP3P to Monatomic Anisotropic Water Models Using Relative Entropy Minimization.
    Lu J; Qiu Y; Baron R; Molinero V
    J Chem Theory Comput; 2014 Sep; 10(9):4104-20. PubMed ID: 26588552
    [TBL] [Abstract][Full Text] [Related]  

  • 24. STOCK: structure mapper and online coarse-graining kit for molecular simulations.
    Bevc S; Junghans C; Praprotnik M
    J Comput Chem; 2015 Mar; 36(7):467-77. PubMed ID: 25504076
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Relative Entropy and Optimization-Driven Coarse-Graining Methods in VOTCA.
    Mashayak SY; Jochum MN; Koschke K; Aluru NR; Rühle V; Junghans C
    PLoS One; 2015; 10(7):e0131754. PubMed ID: 26192992
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Coarse-graining errors and numerical optimization using a relative entropy framework.
    Chaimovich A; Shell MS
    J Chem Phys; 2011 Mar; 134(9):094112. PubMed ID: 21384955
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Configurational-Bias Monte Carlo Back-Mapping Algorithm for Efficient and Rapid Conversion of Coarse-Grained Water Structures into Atomistic Models.
    Loeffler TD; Chan H; Narayanan B; Cherukara MJ; Gray S; Sankaranarayanan SKRS
    J Phys Chem B; 2018 Jul; 122(28):7102-7110. PubMed ID: 29923722
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Going Backward: A Flexible Geometric Approach to Reverse Transformation from Coarse Grained to Atomistic Models.
    Wassenaar TA; Pluhackova K; Böckmann RA; Marrink SJ; Tieleman DP
    J Chem Theory Comput; 2014 Feb; 10(2):676-90. PubMed ID: 26580045
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Adaptive Resolution Simulation of MARTINI Solvents.
    Zavadlav J; Melo MN; Cunha AV; de Vries AH; Marrink SJ; Praprotnik M
    J Chem Theory Comput; 2014 Jun; 10(6):2591-8. PubMed ID: 26580779
    [TBL] [Abstract][Full Text] [Related]  

  • 30. From Coarse Grained to Atomistic: A Serial Multiscale Approach to Membrane Protein Simulations.
    Stansfeld PJ; Sansom MS
    J Chem Theory Comput; 2011 Apr; 7(4):1157-66. PubMed ID: 26606363
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Statistical mechanics of coarse graining: estimating dynamical speedups from excess entropies.
    Armstrong JA; Chakravarty C; Ballone P
    J Chem Phys; 2012 Mar; 136(12):124503. PubMed ID: 22462870
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Adaptive Resolution Simulation (AdResS): A Smooth Thermodynamic and Structural Transition from Atomistic to Coarse Grained Resolution and Vice Versa in a Grand Canonical Fashion.
    Wang H; Schütte C; Delle Site L
    J Chem Theory Comput; 2012 Aug; 8(8):2878-87. PubMed ID: 26592127
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Adaptive resolution simulation of an atomistic protein in MARTINI water.
    Zavadlav J; Melo MN; Marrink SJ; Praprotnik M
    J Chem Phys; 2014 Feb; 140(5):054114. PubMed ID: 24511929
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Multiscale multivariate transfer entropy and application to functional corticocortical coupling.
    Zhang Y; Chen X; Pang X; Cheng S; Li X; Xie P
    J Neural Eng; 2021 May; 18(4):. PubMed ID: 33361565
    [No Abstract]   [Full Text] [Related]  

  • 35. Coarse graining using pretabulated potentials: liquid benzene.
    Zacharopoulos N; Vergadou N; Theodorou DN
    J Chem Phys; 2005 Jun; 122(24):244111. PubMed ID: 16035750
    [TBL] [Abstract][Full Text] [Related]  

  • 36. A multiscale approach to model hydrogen bonding: The case of polyamide.
    Gowers RJ; Carbone P
    J Chem Phys; 2015 Jun; 142(22):224907. PubMed ID: 26071731
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Understanding three-body contributions to coarse-grained force fields.
    Scherer C; Andrienko D
    Phys Chem Chem Phys; 2018 Aug; 20(34):22387-22394. PubMed ID: 30129962
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Toward a Coarse Graining/All Atoms Force Field (CG/AA) from a Multiscale Optimization Method: An Application to the MCM-41 Mesoporous Silicates.
    Ghoufi A; Morineau D; Lefort R; Malfreyt P
    J Chem Theory Comput; 2010 Oct; 6(10):3212-22. PubMed ID: 26616783
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Evaluation of coarse-grained mapping schemes for polysaccharide chains in cellulose.
    Markutsya S; Devarajan A; Baluyut JY; Windus TL; Gordon MS; Lamm MH
    J Chem Phys; 2013 Jun; 138(21):214108. PubMed ID: 23758359
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Efficiency of the Moscow Stock Exchange before 2022.
    Shternshis A; Mazzarisi P; Marmi S
    Entropy (Basel); 2022 Aug; 24(9):. PubMed ID: 36141070
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.