176 related articles for article (PubMed ID: 36398911)
21. DeepPN: a deep parallel neural network based on convolutional neural network and graph convolutional network for predicting RNA-protein binding sites.
Zhang J; Liu B; Wang Z; Lehnert K; Gahegan M
BMC Bioinformatics; 2022 Jun; 23(1):257. PubMed ID: 35768792
[TBL] [Abstract][Full Text] [Related]
22. RBind: computational network method to predict RNA binding sites.
Wang K; Jian Y; Wang H; Zeng C; Zhao Y
Bioinformatics; 2018 Sep; 34(18):3131-3136. PubMed ID: 29718097
[TBL] [Abstract][Full Text] [Related]
23. EMDLP: Ensemble multiscale deep learning model for RNA methylation site prediction.
Wang H; Liu H; Huang T; Li G; Zhang L; Sun Y
BMC Bioinformatics; 2022 Jun; 23(1):221. PubMed ID: 35676633
[TBL] [Abstract][Full Text] [Related]
24. EDLMFC: an ensemble deep learning framework with multi-scale features combination for ncRNA-protein interaction prediction.
Wang J; Zhao Y; Gong W; Liu Y; Wang M; Huang X; Tan J
BMC Bioinformatics; 2021 Mar; 22(1):133. PubMed ID: 33740884
[TBL] [Abstract][Full Text] [Related]
25. DeepSTF: predicting transcription factor binding sites by interpretable deep neural networks combining sequence and shape.
Ding P; Wang Y; Zhang X; Gao X; Liu G; Yu B
Brief Bioinform; 2023 Jul; 24(4):. PubMed ID: 37328639
[TBL] [Abstract][Full Text] [Related]
26. A deep neural network approach for learning intrinsic protein-RNA binding preferences.
Ben-Bassat I; Chor B; Orenstein Y
Bioinformatics; 2018 Sep; 34(17):i638-i646. PubMed ID: 30423078
[TBL] [Abstract][Full Text] [Related]
27. A deep learning method for predicting molecular properties and compound-protein interactions.
Ma J; Zhang R; Li T; Jiang J; Zhao Z; Liu Y; Ma J
J Mol Graph Model; 2022 Dec; 117():108283. PubMed ID: 35994925
[TBL] [Abstract][Full Text] [Related]
28. DLm6Am: A Deep-Learning-Based Tool for Identifying N6,2'-O-Dimethyladenosine Sites in RNA Sequences.
Luo Z; Su W; Lou L; Qiu W; Xiao X; Xu Z
Int J Mol Sci; 2022 Sep; 23(19):. PubMed ID: 36232325
[TBL] [Abstract][Full Text] [Related]
29. HCRNet: high-throughput circRNA-binding event identification from CLIP-seq data using deep temporal convolutional network.
Yang Y; Hou Z; Wang Y; Ma H; Sun P; Ma Z; Wong KC; Li X
Brief Bioinform; 2022 Mar; 23(2):. PubMed ID: 35189638
[TBL] [Abstract][Full Text] [Related]
30. DFpin: Deep learning-based protein-binding site prediction with feature-based non-redundancy from RNA level.
Zhao X; Zhang Y; Du X
Comput Biol Med; 2022 Mar; 142():105216. PubMed ID: 35030497
[TBL] [Abstract][Full Text] [Related]
31. A web server for identifying circRNA-RBP variable-length binding sites based on stacked generalization ensemble deep learning network.
Wang Z; Lei X
Methods; 2022 Sep; 205():179-190. PubMed ID: 35810958
[TBL] [Abstract][Full Text] [Related]
32. DeepD2V: A Novel Deep Learning-Based Framework for Predicting Transcription Factor Binding Sites from Combined DNA Sequence.
Deng L; Wu H; Liu X; Liu H
Int J Mol Sci; 2021 May; 22(11):. PubMed ID: 34073774
[TBL] [Abstract][Full Text] [Related]
33. GraphscoreDTA: optimized graph neural network for protein-ligand binding affinity prediction.
Wang K; Zhou R; Tang J; Li M
Bioinformatics; 2023 Jun; 39(6):. PubMed ID: 37225408
[TBL] [Abstract][Full Text] [Related]
34. DeepDISE: DNA Binding Site Prediction Using a Deep Learning Method.
Hendrix SG; Chang KY; Ryu Z; Xie ZR
Int J Mol Sci; 2021 May; 22(11):. PubMed ID: 34073705
[TBL] [Abstract][Full Text] [Related]
35. MSFF-CDCGAN: A novel method to predict RNA secondary structure based on Generative Adversarial Network.
Yuan S; Gong Y; Wang G; Zhang B; Liu Y; Zhang H
Methods; 2022 Aug; 204():368-375. PubMed ID: 35490852
[TBL] [Abstract][Full Text] [Related]
36. Prediction of 8-state protein secondary structures by a novel deep learning architecture.
Zhang B; Li J; Lü Q
BMC Bioinformatics; 2018 Aug; 19(1):293. PubMed ID: 30075707
[TBL] [Abstract][Full Text] [Related]
37. A novel convolution attention model for predicting transcription factor binding sites by combination of sequence and shape.
Zhang Y; Wang Z; Zeng Y; Liu Y; Xiong S; Wang M; Zhou J; Zou Q
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34929739
[TBL] [Abstract][Full Text] [Related]
38. Research progress on prediction of RNA-protein binding sites in the past five years.
Zuo Y; Chen H; Yang L; Chen R; Zhang X; Deng Z
Anal Biochem; 2024 Aug; 691():115535. PubMed ID: 38643894
[TBL] [Abstract][Full Text] [Related]
39. Binding affinity prediction for protein-ligand complex using deep attention mechanism based on intermolecular interactions.
Seo S; Choi J; Park S; Ahn J
BMC Bioinformatics; 2021 Nov; 22(1):542. PubMed ID: 34749664
[TBL] [Abstract][Full Text] [Related]
40. DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequences.
Lee I; Keum J; Nam H
PLoS Comput Biol; 2019 Jun; 15(6):e1007129. PubMed ID: 31199797
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]