479 related articles for article (PubMed ID: 36399059)
1. Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads.
Zhang Y; Jiang F; Yang B; Wang S; Wang H; Wang A; Xu D; Fan W
Gigascience; 2022 Nov; 11():. PubMed ID: 36399059
[TBL] [Abstract][Full Text] [Related]
2. Recovery of metagenome-assembled microbial genomes from a full-scale biogas plant of food waste by pacific biosciences high-fidelity sequencing.
Jiang F; Li Q; Wang S; Shen T; Wang H; Wang A; Xu D; Yuan L; Lei L; Chen R; Yang B; Deng Y; Fan W
Front Microbiol; 2022; 13():1095497. PubMed ID: 36699587
[TBL] [Abstract][Full Text] [Related]
3. Improved Assembly of Metagenome-Assembled Genomes and Viruses in Tibetan Saline Lake Sediment by HiFi Metagenomic Sequencing.
Tao Y; Xun F; Zhao C; Mao Z; Li B; Xing P; Wu QL
Microbiol Spectr; 2023 Feb; 11(1):e0332822. PubMed ID: 36475839
[TBL] [Abstract][Full Text] [Related]
4. Long-read metagenomics retrieves complete single-contig bacterial genomes from canine feces.
Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
BMC Genomics; 2021 May; 22(1):330. PubMed ID: 33957869
[TBL] [Abstract][Full Text] [Related]
5. Long-read based de novo assembly of low-complexity metagenome samples results in finished genomes and reveals insights into strain diversity and an active phage system.
Somerville V; Lutz S; Schmid M; Frei D; Moser A; Irmler S; Frey JE; Ahrens CH
BMC Microbiol; 2019 Jun; 19(1):143. PubMed ID: 31238873
[TBL] [Abstract][Full Text] [Related]
6. A catalog of microbial genes and metagenome-assembled genomes from the quail gut microbiome.
Xiong X; Rao Y; Ma J; Wang Z; He Q; Gong J; Sheng W; Xu J; Zhu X; Tan Y; Yang Y
Poult Sci; 2023 Oct; 102(10):102931. PubMed ID: 37499616
[TBL] [Abstract][Full Text] [Related]
7. Finding the right fit: evaluation of short-read and long-read sequencing approaches to maximize the utility of clinical microbiome data.
Gehrig JL; Portik DM; Driscoll MD; Jackson E; Chakraborty S; Gratalo D; Ashby M; Valladares R
Microb Genom; 2022 Mar; 8(3):. PubMed ID: 35302439
[TBL] [Abstract][Full Text] [Related]
8. Human reference gut microbiome catalog including newly assembled genomes from under-represented Asian metagenomes.
Kim CY; Lee M; Yang S; Kim K; Yong D; Kim HR; Lee I
Genome Med; 2021 Aug; 13(1):134. PubMed ID: 34446072
[TBL] [Abstract][Full Text] [Related]
9. Long-Read Sequencing Improves Recovery of Picoeukaryotic Genomes and Zooplankton Marker Genes from Marine Metagenomes.
Patin NV; Goodwin KD
mSystems; 2022 Dec; 7(6):e0059522. PubMed ID: 36448813
[TBL] [Abstract][Full Text] [Related]
10. HiFi metagenomic sequencing enables assembly of accurate and complete genomes from human gut microbiota.
Kim CY; Ma J; Lee I
Nat Commun; 2022 Oct; 13(1):6367. PubMed ID: 36289209
[TBL] [Abstract][Full Text] [Related]
11. A comprehensive investigation of metagenome assembly by linked-read sequencing.
Zhang L; Fang X; Liao H; Zhang Z; Zhou X; Han L; Chen Y; Qiu Q; Li SC
Microbiome; 2020 Nov; 8(1):156. PubMed ID: 33176883
[TBL] [Abstract][Full Text] [Related]
12. Metagenome-assembled genomes and gene catalog from the chicken gut microbiome aid in deciphering antibiotic resistomes.
Feng Y; Wang Y; Zhu B; Gao GF; Guo Y; Hu Y
Commun Biol; 2021 Nov; 4(1):1305. PubMed ID: 34795385
[TBL] [Abstract][Full Text] [Related]
13. Recovery of strain-resolved genomes from human microbiome through an integration framework of single-cell genomics and metagenomics.
Arikawa K; Ide K; Kogawa M; Saeki T; Yoda T; Endoh T; Matsuhashi A; Takeyama H; Hosokawa M
Microbiome; 2021 Oct; 9(1):202. PubMed ID: 34641955
[TBL] [Abstract][Full Text] [Related]
14. Evaluating and improving the representation of bacterial contents in long-read metagenome assemblies.
Feng X; Li H
Genome Biol; 2024 Apr; 25(1):92. PubMed ID: 38605401
[TBL] [Abstract][Full Text] [Related]
15. Novel canine high-quality metagenome-assembled genomes, prophages and host-associated plasmids provided by long-read metagenomics together with Hi-C proximity ligation.
Cuscó A; Pérez D; Viñes J; Fàbregas N; Francino O
Microb Genom; 2022 Mar; 8(3):. PubMed ID: 35298370
[TBL] [Abstract][Full Text] [Related]
16. Comparing genomes recovered from time-series metagenomes using long- and short-read sequencing technologies.
Orellana LH; Krüger K; Sidhu C; Amann R
Microbiome; 2023 May; 11(1):105. PubMed ID: 37179340
[TBL] [Abstract][Full Text] [Related]
17. An Integrated Metagenome Catalog Reveals New Insights into the Murine Gut Microbiome.
Lesker TR; Durairaj AC; Gálvez EJC; Lagkouvardos I; Baines JF; Clavel T; Sczyrba A; McHardy AC; Strowig T
Cell Rep; 2020 Mar; 30(9):2909-2922.e6. PubMed ID: 32130896
[TBL] [Abstract][Full Text] [Related]
18. A Catalog of over 5,000 Metagenome-Assembled Microbial Genomes from the Caprinae Gut Microbiota.
Zhang XX; Lv QB; Yan QL; Zhang Y; Guo RC; Meng JX; Ma H; Qin SY; Zhu QH; Li CQ; Liu R; Liu G; Li SH; Sun DB; Ni HB
Microbiol Spectr; 2022 Dec; 10(6):e0221122. PubMed ID: 36321901
[TBL] [Abstract][Full Text] [Related]
19. Terabase-Scale Coassembly of a Tropical Soil Microbiome.
Riley R; Bowers RM; Camargo AP; Campbell A; Egan R; Eloe-Fadrosh EA; Foster B; Hofmeyr S; Huntemann M; Kellom M; Kimbrel JA; Oliker L; Yelick K; Pett-Ridge J; Salamov A; Varghese NJ; Clum A
Microbiol Spectr; 2023 Aug; 11(4):e0020023. PubMed ID: 37310219
[TBL] [Abstract][Full Text] [Related]
20. MarkerMAG: linking metagenome-assembled genomes (MAGs) with 16S rRNA marker genes using paired-end short reads.
Song W; Zhang S; Thomas T
Bioinformatics; 2022 Aug; 38(15):3684-3688. PubMed ID: 35713513
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
