160 related articles for article (PubMed ID: 36405967)
1. SARS-CoV-2 variants of concern surveillance including Omicron using RT-PCR-based genotyping offers comparable performance to whole genome sequencing.
Vanoni S; Matulevicius A; Avdiu B; Scantamburlo G; Ulekleiv C; Brzoska PM; Furtado MR; Feenstra JDM; Rico A; Gandhi M; Giacobazzi E; Masi E; Paulmichl M; Nofziger C
Front Cell Infect Microbiol; 2022; 12():960065. PubMed ID: 36405967
[TBL] [Abstract][Full Text] [Related]
2. Emergency SARS-CoV-2 Variants of Concern: Novel Multiplex Real-Time RT-PCR Assay for Rapid Detection and Surveillance.
Chung HY; Jian MJ; Chang CK; Lin JC; Yeh KM; Chen CW; Hsieh SS; Hung KS; Tang SH; Perng CL; Chang FY; Wang CH; Shang HS
Microbiol Spectr; 2022 Feb; 10(1):e0251321. PubMed ID: 35196812
[TBL] [Abstract][Full Text] [Related]
3. [Rapid detection and genotyping of SARS-CoV-2 Omicron BA.4/5 variants using a RT-PCR and CRISPR-Cas12a-based assay].
Ma Y; Zou L; Liang Y; Liu Q; Sun Q; Pang Y; Lin H; Deng X; Tang S
Nan Fang Yi Ke Da Xue Xue Bao; 2023 Apr; 43(4):516-526. PubMed ID: 37202186
[TBL] [Abstract][Full Text] [Related]
4. Accessible and Adaptable Multiplexed Real-Time PCR Approaches to Identify SARS-CoV-2 Variants of Concern.
Yan T; Xu Y; Zheng R; Zeng X; Chen Z; Lin S; Xia Z; Liao Y; Zhang Y; Li Q
Microbiol Spectr; 2022 Oct; 10(5):e0322222. PubMed ID: 36106882
[TBL] [Abstract][Full Text] [Related]
5. Comparison of analytical performance and economic value of two biosurveillance methods for tracking SARS-COV-2 variants of concern.
Pinkhover NP; Pontbriand KM; Fletcher KP; Sanchez E; Okello K; Garvey LM; Pum A; Li K; DeOliveira G; Proctor T; Feenstra JDM; Sorel O; Gandhi M; Auclair JR
Microbiol Spectr; 2024 Feb; 12(2):e0348423. PubMed ID: 38206048
[TBL] [Abstract][Full Text] [Related]
6. Efficient SARS-CoV-2 Surveillance during the Pandemic-Endemic Transition Using PCR-Based Genotyping Assays.
Koets L; van Leeuwen K; Derlagen M; van Wijk J; Keijzer N; Feenstra JDM; Gandhi M; Sorel O; van de Laar TJW; Koppelman MHGM
Microbiol Spectr; 2023 Jun; 11(3):e0345022. PubMed ID: 37154727
[TBL] [Abstract][Full Text] [Related]
7. Rapid and Accurate Identification of SARS-CoV-2 Variants Using Real Time PCR Assays.
Borillo GA; Kagan RM; Marlowe EM
Front Cell Infect Microbiol; 2022; 12():894613. PubMed ID: 35619652
[TBL] [Abstract][Full Text] [Related]
8. Developing an Amplification Refractory Mutation System-Quantitative Reverse Transcription-PCR Assay for Rapid and Sensitive Screening of SARS-CoV-2 Variants of Concern.
Xiong D; Zhang X; Shi M; Wang N; He P; Dong Z; Zhong J; Luo J; Wang Y; Yu J; Wei H
Microbiol Spectr; 2022 Feb; 10(1):e0143821. PubMed ID: 34985323
[TBL] [Abstract][Full Text] [Related]
9. Combined Use of RT-qPCR and NGS for Identification and Surveillance of SARS-CoV-2 Variants of Concern in Residual Clinical Laboratory Samples in Miami-Dade County, Florida.
Carattini YL; Griswold A; Williams S; Valiathan R; Zhou Y; Shukla B; Abbo LM; Parra K; Jorda M; Nimer SD; Sologon C; Gallegos HR; Weiss RE; Ferreira T; Memon A; Paige PG; Thomas E; Andrews DM
Viruses; 2023 Feb; 15(3):. PubMed ID: 36992302
[TBL] [Abstract][Full Text] [Related]
10. RT-PCR genotyping assays to identify SARS-CoV-2 variants in England in 2021: a design and retrospective evaluation study.
Bray N; Sopwith W; Edmunds M; Vansteenhouse H; Feenstra JDM; Jacobs P; Rajput K; O'Connell AM; Smith ML; Blomquist P; Hatziioanou D; Elson R; Vivancos R; Gallagher E; Wigglesworth MJ; Dominiczak A; Hopkins S; Lake IR
Lancet Microbe; 2024 Feb; 5(2):e173-e180. PubMed ID: 38244555
[TBL] [Abstract][Full Text] [Related]
11. Identification of SARS-CoV-2 Variants of Concern Using Amplicon Next-Generation Sequencing.
Nasereddin A; Golan Berman H; Wolf DG; Oiknine-Djian E; Adar S
Microbiol Spectr; 2022 Aug; 10(4):e0073622. PubMed ID: 35758686
[TBL] [Abstract][Full Text] [Related]
12. Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants.
Li J; Cheng R; Bian Z; Niu J; Xia J; Mao G; Liu H; Wu C; Hao C
Appl Microbiol Biotechnol; 2024 Dec; 108(1):35. PubMed ID: 38183475
[TBL] [Abstract][Full Text] [Related]
13. Development of a panel of three multiplex allele-specific qRT-PCR assays for quick differentiation of recombinant variants and Omicron subvariants of SARS-CoV-2.
Li J; Gao Z; Chen J; Cheng R; Niu J; Zhang J; Yang Y; Yuan X; Xia J; Mao G; Liu H; Dong Y; Wu C
Front Cell Infect Microbiol; 2022; 12():953027. PubMed ID: 36061868
[TBL] [Abstract][Full Text] [Related]
14. Accelerating pandemic response with the emergency Omicron RT-PCR test: A comprehensive solution for COVID-19 diagnosis and tracking.
Chung HY; Jian MJ; Chang CK; Lin JC; Yeh KM; Chen CW; Hsieh SS; Hung KS; Chen CS; Tang SH; Perng CL; Chang FY; Wang CH; Hung YJ; Shang HS
J Med Virol; 2023 Jul; 95(7):e28914. PubMed ID: 37394776
[TBL] [Abstract][Full Text] [Related]
15. Evaluation of a commercial SARS-CoV-2 multiplex PCR genotyping assay for variant identification in resource-scarce settings.
Umunnakwe CN; Makatini ZN; Maphanga M; Mdunyelwa A; Mlambo KM; Manyaka P; Nijhuis M; Wensing A; Tempelman HA
PLoS One; 2022; 17(6):e0269071. PubMed ID: 35749403
[TBL] [Abstract][Full Text] [Related]
16. Receptor-Binding-Motif-Targeted Sanger Sequencing: a Quick and Cost-Effective Strategy for Molecular Surveillance of SARS-CoV-2 Variants.
Chaki SP; Kahl-McDonagh MM; Neuman BW; Zuelke KA
Microbiol Spectr; 2022 Jun; 10(3):e0066522. PubMed ID: 35638906
[TBL] [Abstract][Full Text] [Related]
17. Development and Validation of an In-House Real-Time Reverse-Transcriptase Polymerase Chain Reaction Assay for SARS-CoV-2 Omicron Lineage Subtyping between BA.1 and BA.2.
Pham D; Maddocks S; Dwyer DE; Sintchenko V; Kok J; Rockett RJ
Viruses; 2022 Aug; 14(8):. PubMed ID: 36016382
[TBL] [Abstract][Full Text] [Related]
18. Comparison of a Multiplex Real-Time PCR Technique with Oxford Nanopore Technologies Next-Generation Sequencing for Identification of SARS-CoV-2 Variants of Concern.
Ahmadi Z; Maleki A; Eybpoosh S; Fereydouni Z; Tavakoli M; Kashanian S; Farhan Asadi L; Nemati AH; Salehi-Vaziri M
Intervirology; 2023; 66(1):136-141. PubMed ID: 37812919
[TBL] [Abstract][Full Text] [Related]
19. Identification of SARS-CoV-2 Omicron variant using spike gene target failure and genotyping assays, Gauteng, South Africa, 2021.
Subramoney K; Mtileni N; Bharuthram A; Davis A; Kalenga B; Rikhotso M; Maphahlele M; Giandhari J; Naidoo Y; Pillay S; Ramphal U; Ramphal Y; Tegally H; Wilkinson E; Mohale T; Ismail A; Mashishi B; Mbenenge N; de Oliveira T; Makatini Z; Fielding BC; Treurnicht FK;
J Med Virol; 2022 Aug; 94(8):3676-3684. PubMed ID: 35441368
[TBL] [Abstract][Full Text] [Related]
20. SARS-CoV-2 multiplex RT-PCR to detect variants of concern (VOCs) in Malaysia, between January to May 2021.
Fu JYL; Chong YM; Sam IC; Chan YF
J Virol Methods; 2022 Mar; 301():114462. PubMed ID: 35026305
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
