These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

129 related articles for article (PubMed ID: 36464715)

  • 1. Graphlets in comparison of Petri net-based models of biological systems.
    Szawulak B; Formanowicz P
    Sci Rep; 2022 Dec; 12(1):20942. PubMed ID: 36464715
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Extending the Applicability of Graphlets to Directed Networks.
    Aparicio D; Ribeiro P; Silva F
    IEEE/ACM Trans Comput Biol Bioinform; 2017; 14(6):1302-1315. PubMed ID: 27362986
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Two theoretical and practical aspects of knitting technique: invariants and a new class of Petri net.
    Chao DY; Wang DT
    IEEE Trans Syst Man Cybern B Cybern; 1997; 27(6):962-77. PubMed ID: 18263104
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Comparing Petri net-based models of biological systems using Holmes.
    Szawulak B; Radom M; Formanowicz P
    Bioinformatics; 2022 Sep; 38(19):4652-4653. PubMed ID: 35976128
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Modularization of biochemical networks based on classification of Petri net t-invariants.
    Grafahrend-Belau E; Schreiber F; Heiner M; Sackmann A; Junker BH; Grunwald S; Speer A; Winder K; Koch I
    BMC Bioinformatics; 2008 Feb; 9():90. PubMed ID: 18257938
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Biological network comparison using graphlet degree distribution.
    Przulj N
    Bioinformatics; 2007 Jan; 23(2):e177-83. PubMed ID: 17237089
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Computational modeling of signal transduction networks without kinetic parameters: Petri net approaches.
    Koch I; Büttner B
    Am J Physiol Cell Physiol; 2023 May; 324(5):C1126-C1140. PubMed ID: 36878844
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Topological analysis of metabolic networks based on petri net theory.
    Zevedei-Oancea I; Schuster S
    Stud Health Technol Inform; 2011; 162():17-37. PubMed ID: 21685562
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Graphettes: Constant-time determination of graphlet and orbit identity including (possibly disconnected) graphlets up to size 8.
    Hasan A; Chung PC; Hayes W
    PLoS One; 2017; 12(8):e0181570. PubMed ID: 28832661
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Topological analysis of metabolic networks based on Petri net theory.
    Zevedei-Oancea I; Schuster S
    In Silico Biol; 2003; 3(3):323-45. PubMed ID: 12954094
    [TBL] [Abstract][Full Text] [Related]  

  • 11. An Algorithm to Automatically Generate the Combinatorial Orbit Counting Equations.
    Melckenbeeck I; Audenaert P; Michoel T; Colle D; Pickavet M
    PLoS One; 2016; 11(1):e0147078. PubMed ID: 26797021
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Modeling of the U1 snRNP assembly pathway in alternative splicing in human cells using Petri nets.
    Kielbassa J; Bortfeldt R; Schuster S; Koch I
    Comput Biol Chem; 2009 Feb; 33(1):46-61. PubMed ID: 18775676
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Probabilistic graphlets capture biological function in probabilistic molecular networks.
    Doria-Belenguer S; Youssef MK; Böttcher R; Malod-Dognin N; Pržulj N
    Bioinformatics; 2020 Dec; 36(Suppl_2):i804-i812. PubMed ID: 33381834
    [TBL] [Abstract][Full Text] [Related]  

  • 14. VANESA: An open-source hybrid functional Petri net modeling and simulation environment in systems biology.
    Brinkrolf C; Ochel L; Hofestädt R
    Biosystems; 2021 Dec; 210():104531. PubMed ID: 34492317
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Searching for significant reactions and subprocesses in models of biological systems based on Petri nets.
    Gutowska K; Formanowicz P
    Comput Biol Med; 2024 Jan; 168():107729. PubMed ID: 37995533
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Constructing biological pathway models with hybrid functional petri nets.
    Doi A; Fujita S; Matsuno H; Nagasaki M; Miyano S
    Stud Health Technol Inform; 2011; 162():92-112. PubMed ID: 21685566
    [TBL] [Abstract][Full Text] [Related]  

  • 17. GraphCrunch: a tool for large network analyses.
    Milenković T; Lai J; Przulj N
    BMC Bioinformatics; 2008 Jan; 9():70. PubMed ID: 18230190
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Modelling and measuring complexity of traditional and ancient technologies using Petri nets.
    Fajardo S; Kleijn J; Takes FW; Langejans GHJ
    PLoS One; 2022; 17(11):e0278310. PubMed ID: 36445915
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Combinatorial algorithm for counting small induced graphs and orbits.
    Hočevar T; Demšar J
    PLoS One; 2017; 12(2):e0171428. PubMed ID: 28182743
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Hemojuvelin-hepcidin axis modeled and analyzed using Petri nets.
    Formanowicz D; Kozak A; Głowacki T; Radom M; Formanowicz P
    J Biomed Inform; 2013 Dec; 46(6):1030-43. PubMed ID: 23954231
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.