BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

122 related articles for article (PubMed ID: 36494044)

  • 1. An Optimized Proteomics Approach Reveals Novel Alternative Proteins in Mouse Liver Development.
    Yang Y; Wang H; Zhang Y; Chen L; Chen G; Bao Z; Yang Y; Xie Z; Zhao Q
    Mol Cell Proteomics; 2023 Jan; 22(1):100480. PubMed ID: 36494044
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Employing non-targeted interactomics approach and subcellular fractionation to increase our understanding of the ghost proteome.
    Garcia-Del Rio DF; Cardon T; Eyckerman S; Fournier I; Bonnefond A; Gevaert K; Salzet M
    iScience; 2023 Feb; 26(2):105943. PubMed ID: 36866041
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Optimized Sample Preparation Workflow for Improved Identification of Ghost Proteins.
    Cardon T; Hervé F; Delcourt V; Roucou X; Salzet M; Franck J; Fournier I
    Anal Chem; 2020 Jan; 92(1):1122-1129. PubMed ID: 31829555
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Newfound Coding Potential of Transcripts Unveils Missing Members of Human Protein Communities.
    Leblanc S; Brunet MA; Jacques JF; Lekehal AM; Duclos A; Tremblay A; Bruggeman-Gascon A; Samandi S; Brunelle M; Cohen AA; Scott MS; Roucou X
    Genomics Proteomics Bioinformatics; 2023 Jun; 21(3):515-534. PubMed ID: 36183975
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Combined Mass Spectrometry Imaging and Top-down Microproteomics Reveals Evidence of a Hidden Proteome in Ovarian Cancer.
    Delcourt V; Franck J; Leblanc E; Narducci F; Robin YM; Gimeno JP; Quanico J; Wisztorski M; Kobeissy F; Jacques JF; Roucou X; Salzet M; Fournier I
    EBioMedicine; 2017 Jul; 21():55-64. PubMed ID: 28629911
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protocol to identify human subcellular alternative protein interactions using cross-linking mass spectrometry.
    Garcia-Del Rio DF; Fournier I; Cardon T; Salzet M
    STAR Protoc; 2023 Sep; 4(3):102380. PubMed ID: 37384523
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation events.
    Menschaert G; Van Criekinge W; Notelaers T; Koch A; Crappé J; Gevaert K; Van Damme P
    Mol Cell Proteomics; 2013 Jul; 12(7):1780-90. PubMed ID: 23429522
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Alternative proteins are functional regulators in cell reprogramming by PKA activation.
    Cardon T; Franck J; Coyaud E; Laurent EMN; Damato M; Maffia M; Vergara D; Fournier I; Salzet M
    Nucleic Acids Res; 2020 Aug; 48(14):7864-7882. PubMed ID: 32324228
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Identification of novel alternative splicing biomarkers for breast cancer with LC/MS/MS and RNA-Seq.
    Zhang F; Deng CK; Wang M; Deng B; Barber R; Huang G
    BMC Bioinformatics; 2020 Dec; 21(Suppl 9):541. PubMed ID: 33272210
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Discovery of novel genes and gene isoforms by integrating transcriptomic and proteomic profiling from mouse liver.
    Wu P; Zhang H; Lin W; Hao Y; Ren L; Zhang C; Li N; Wei H; Jiang Y; He F
    J Proteome Res; 2014 May; 13(5):2409-19. PubMed ID: 24717071
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The alternative proteome in neurobiology.
    Mohaupt P; Roucou X; Delaby C; Vialaret J; Lehmann S; Hirtz C
    Front Cell Neurosci; 2022; 16():1019680. PubMed ID: 36467612
    [TBL] [Abstract][Full Text] [Related]  

  • 12. SARS-Cov-2 Interactome with Human Ghost Proteome: A Neglected World Encompassing a Wealth of Biological Data.
    Cardon T; Fournier I; Salzet M
    Microorganisms; 2020 Dec; 8(12):. PubMed ID: 33352703
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A proteogenomics approach integrating proteomics and ribosome profiling increases the efficiency of protein identification and enables the discovery of alternative translation start sites.
    Koch A; Gawron D; Steyaert S; Ndah E; Crappé J; De Keulenaer S; De Meester E; Ma M; Shen B; Gevaert K; Van Criekinge W; Van Damme P; Menschaert G
    Proteomics; 2014 Dec; 14(23-24):2688-98. PubMed ID: 25156699
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A Hidden Human Proteome Signature Characterizes the Epithelial Mesenchymal Transition Program.
    Vergara D; Verri T; Damato M; Trerotola M; Simeone P; Franck J; Fournier I; Salzet M; Maffia M
    Curr Pharm Des; 2020; 26(3):372-375. PubMed ID: 31995001
    [TBL] [Abstract][Full Text] [Related]  

  • 15. PASS: A Proteomics Alternative Splicing Screening Pipeline.
    Wu P; Pu L; Deng B; Li Y; Chen Z; Liu W
    Proteomics; 2019 Jul; 19(13):e1900041. PubMed ID: 31095856
    [TBL] [Abstract][Full Text] [Related]  

  • 16. The Protein Coded by a Short Open Reading Frame, Not by the Annotated Coding Sequence, Is the Main Gene Product of the Dual-Coding Gene
    Delcourt V; Brunelle M; Roy AV; Jacques JF; Salzet M; Fournier I; Roucou X
    Mol Cell Proteomics; 2018 Dec; 17(12):2402-2411. PubMed ID: 30181344
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An integrative proteogenomics approach reveals peptides encoded by annotated lincRNA in the mouse kidney inner medulla.
    Flower CT; Chen L; Jung HJ; Raghuram V; Knepper MA; Yang CR
    Physiol Genomics; 2020 Oct; 52(10):485-491. PubMed ID: 32866085
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Comparative Proteomic Profiling of Unannotated Microproteins and Alternative Proteins in Human Cell Lines.
    Cao X; Khitun A; Na Z; Dumitrescu DG; Kubica M; Olatunji E; Slavoff SA
    J Proteome Res; 2020 Aug; 19(8):3418-3426. PubMed ID: 32449352
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Direct detection of alternative open reading frames translation products in human significantly expands the proteome.
    Vanderperre B; Lucier JF; Bissonnette C; Motard J; Tremblay G; Vanderperre S; Wisztorski M; Salzet M; Boisvert FM; Roucou X
    PLoS One; 2013; 8(8):e70698. PubMed ID: 23950983
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
    Bai Y; Kinne J; Donham B; Jiang F; Ding L; Hassler JR; Kaufman RJ
    BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.