BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

228 related articles for article (PubMed ID: 36495920)

  • 1. Structural Plasticity of Pioneer Factor Sox2 and DNA Bendability Modulate Nucleosome Engagement and Sox2-Oct4 Synergism.
    Malaga Gadea FC; Nikolova EN
    J Mol Biol; 2023 Jan; 435(2):167916. PubMed ID: 36495920
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Histone modifications regulate pioneer transcription factor cooperativity.
    Sinha KK; Bilokapic S; Du Y; Malik D; Halic M
    Nature; 2023 Jul; 619(7969):378-384. PubMed ID: 37225990
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Nucleosome allostery in pioneer transcription factor binding.
    Tan C; Takada S
    Proc Natl Acad Sci U S A; 2020 Aug; 117(34):20586-20596. PubMed ID: 32778600
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mechanisms of OCT4-SOX2 motif readout on nucleosomes.
    Michael AK; Grand RS; Isbel L; Cavadini S; Kozicka Z; Kempf G; Bunker RD; Schenk AD; Graff-Meyer A; Pathare GR; Weiss J; Matsumoto S; Burger L; Schübeler D; Thomä NH
    Science; 2020 Jun; 368(6498):1460-1465. PubMed ID: 32327602
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Nucleosome binding by the pioneer transcription factor OCT4.
    Echigoya K; Koyama M; Negishi L; Takizawa Y; Mizukami Y; Shimabayashi H; Kuroda A; Kurumizaka H
    Sci Rep; 2020 Jul; 10(1):11832. PubMed ID: 32678275
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Differential Nucleosome Occupancies across Oct4-Sox2 Binding Sites in Murine Embryonic Stem Cells.
    Sebeson A; Xi L; Zhang Q; Sigmund A; Wang JP; Widom J; Wang X
    PLoS One; 2015; 10(5):e0127214. PubMed ID: 25992972
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Dissecting OCT4 defines the role of nucleosome binding in pluripotency.
    Roberts GA; Ozkan B; Gachulincová I; O'Dwyer MR; Hall-Ponsele E; Saxena M; Robinson PJ; Soufi A
    Nat Cell Biol; 2021 Aug; 23(8):834-845. PubMed ID: 34354236
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Nonreciprocal and Conditional Cooperativity Directs the Pioneer Activity of Pluripotency Transcription Factors.
    Li S; Zheng EB; Zhao L; Liu S
    Cell Rep; 2019 Sep; 28(10):2689-2703.e4. PubMed ID: 31484078
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Nucleosome-bound SOX2 and SOX11 structures elucidate pioneer factor function.
    Dodonova SO; Zhu F; Dienemann C; Taipale J; Cramer P
    Nature; 2020 Apr; 580(7805):669-672. PubMed ID: 32350470
    [TBL] [Abstract][Full Text] [Related]  

  • 10. OCT4 interprets and enhances nucleosome flexibility.
    MacCarthy CM; Huertas J; Ortmeier C; Vom Bruch H; Tan DS; Reinke D; Sander A; Bergbrede T; Jauch R; Schöler HR; Cojocaru V
    Nucleic Acids Res; 2022 Oct; 50(18):10311-10327. PubMed ID: 36130732
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Structural Mechanism behind Distinct Efficiency of Oct4/Sox2 Proteins in Differentially Spaced DNA Complexes.
    Yesudhas D; Anwar MA; Panneerselvam S; Durai P; Shah M; Choi S
    PLoS One; 2016; 11(1):e0147240. PubMed ID: 26790000
    [TBL] [Abstract][Full Text] [Related]  

  • 12. High throughput screening identifies SOX2 as a super pioneer factor that inhibits DNA methylation maintenance at its binding sites.
    Vanzan L; Soldati H; Ythier V; Anand S; Braun SMG; Francis N; Murr R
    Nat Commun; 2021 Jun; 12(1):3337. PubMed ID: 34099689
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Cooperative DNA Recognition Modulated by an Interplay between Protein-Protein Interactions and DNA-Mediated Allostery.
    Merino F; Bouvier B; Cojocaru V
    PLoS Comput Biol; 2015 Jun; 11(6):e1004287. PubMed ID: 26067358
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Pioneer transcription factors target partial DNA motifs on nucleosomes to initiate reprogramming.
    Soufi A; Garcia MF; Jaroszewicz A; Osman N; Pellegrini M; Zaret KS
    Cell; 2015 Apr; 161(3):555-568. PubMed ID: 25892221
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Catalytic-Independent Functions of PARP-1 Determine Sox2 Pioneer Activity at Intractable Genomic Loci.
    Liu Z; Kraus WL
    Mol Cell; 2017 Feb; 65(4):589-603.e9. PubMed ID: 28212747
    [TBL] [Abstract][Full Text] [Related]  

  • 16. OCT4 cooperates with distinct ATP-dependent chromatin remodelers in naïve and primed pluripotent states in human.
    Huang X; Park KM; Gontarz P; Zhang B; Pan J; McKenzie Z; Fischer LA; Dong C; Dietmann S; Xing X; Shliaha PV; Yang J; Li D; Ding J; Lungjangwa T; Mitalipova M; Khan SA; Imsoonthornruksa S; Jensen N; Wang T; Kadoch C; Jaenisch R; Wang J; Theunissen TW
    Nat Commun; 2021 Aug; 12(1):5123. PubMed ID: 34446700
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Structural basis for the SOX-dependent genomic redistribution of OCT4 in stem cell differentiation.
    Merino F; Ng CKL; Veerapandian V; Schöler HR; Jauch R; Cojocaru V
    Structure; 2014 Sep; 22(9):1274-1286. PubMed ID: 25126959
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Zfp206, Oct4, and Sox2 are integrated components of a transcriptional regulatory network in embryonic stem cells.
    Yu HB; Kunarso G; Hong FH; Stanton LW
    J Biol Chem; 2009 Nov; 284(45):31327-35. PubMed ID: 19740739
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Different chromatin-scanning modes lead to targeting of compacted chromatin by pioneer factors FOXA1 and SOX2.
    Lerner J; Katznelson A; Zhang J; Zaret KS
    Cell Rep; 2023 Jul; 42(7):112748. PubMed ID: 37405916
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Pluripotency reprogramming by competent and incompetent POU factors uncovers temporal dependency for Oct4 and Sox2.
    Malik V; Glaser LV; Zimmer D; Velychko S; Weng M; Holzner M; Arend M; Chen Y; Srivastava Y; Veerapandian V; Shah Z; Esteban MA; Wang H; Chen J; Schöler HR; Hutchins AP; Meijsing SH; Pott S; Jauch R
    Nat Commun; 2019 Aug; 10(1):3477. PubMed ID: 31375664
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.