BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

166 related articles for article (PubMed ID: 36529689)

  • 1. Exon Elongation Added Intrinsically Disordered Regions to the Encoded Proteins and Facilitated the Emergence of the Last Eukaryotic Common Ancestor.
    Fukuchi S; Noguchi T; Anbo H; Homma K
    Mol Biol Evol; 2023 Jan; 40(1):. PubMed ID: 36529689
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Both Intrinsically Disordered Regions and Structural Domains Evolve Rapidly in Immune-Related Mammalian Proteins.
    Homma K; Anbo H; Noguchi T; Fukuchi S
    Int J Mol Sci; 2018 Dec; 19(12):. PubMed ID: 30518031
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Codon usage is less optimized in eukaryotic gene segments encoding intrinsically disordered regions than in those encoding structural domains.
    Homma K; Noguchi T; Fukuchi S
    Nucleic Acids Res; 2016 Dec; 44(21):10051-10061. PubMed ID: 27915289
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Whence genes in pieces: reconstruction of the exon-intron gene structures of the last eukaryotic common ancestor and other ancestral eukaryotes.
    Koonin EV; Csuros M; Rogozin IB
    Wiley Interdiscip Rev RNA; 2013; 4(1):93-105. PubMed ID: 23139082
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Sequence conservation of protein binding segments in intrinsically disordered regions.
    Ota H; Fukuchi S
    Biochem Biophys Res Commun; 2017 Dec; 494(3-4):602-607. PubMed ID: 29066345
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Intrinsically disordered regions have specific functions in mitochondrial and nuclear proteins.
    Homma K; Fukuchi S; Nishikawa K; Sakamoto S; Sugawara H
    Mol Biosyst; 2012 Jan; 8(1):247-55. PubMed ID: 21866296
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Insights into the evolutionary forces that shape the codon usage in the viral genome segments encoding intrinsically disordered protein regions.
    Kumar N; Kaushik R; Tennakoon C; Uversky VN; Longhi S; Zhang KYJ; Bhatia S
    Brief Bioinform; 2021 Sep; 22(5):. PubMed ID: 33866372
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Systematic identification of conditionally folded intrinsically disordered regions by AlphaFold2.
    Alderson TR; Pritišanac I; Kolarić Đ; Moses AM; Forman-Kay JD
    Proc Natl Acad Sci U S A; 2023 Oct; 120(44):e2304302120. PubMed ID: 37878721
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Origin and evolution of spliceosomal introns.
    Rogozin IB; Carmel L; Csuros M; Koonin EV
    Biol Direct; 2012 Apr; 7():11. PubMed ID: 22507701
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Prediction of protein-protein interactions using sequences of intrinsically disordered regions.
    Kibar G; Vingron M
    Proteins; 2023 Jul; 91(7):980-990. PubMed ID: 36908253
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Regulated splicing of large exons is linked to phase-separation of vertebrate transcription factors.
    Kawachi T; Masuda A; Yamashita Y; Takeda JI; Ohkawara B; Ito M; Ohno K
    EMBO J; 2021 Nov; 40(22):e107485. PubMed ID: 34605568
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Evolutionary analyses of intrinsically disordered regions reveal widespread signals of conservation.
    Singleton MD; Eisen MB
    PLoS Comput Biol; 2024 Apr; 20(4):e1012028. PubMed ID: 38662765
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Markov models of amino acid substitution to study proteins with intrinsically disordered regions.
    Szalkowski AM; Anisimova M
    PLoS One; 2011; 6(5):e20488. PubMed ID: 21647374
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Coding Regions of Intrinsic Disorder Accommodate Parallel Functions.
    Pancsa R; Tompa P
    Trends Biochem Sci; 2016 Nov; 41(11):898-906. PubMed ID: 27647212
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Discerning evolutionary trends in post-translational modification and the effect of intrinsic disorder: Analysis of methylation, acetylation and ubiquitination sites in human proteins.
    Narasumani M; Harrison PM
    PLoS Comput Biol; 2018 Aug; 14(8):e1006349. PubMed ID: 30096183
    [TBL] [Abstract][Full Text] [Related]  

  • 16. GenePainter: a fast tool for aligning gene structures of eukaryotic protein families, visualizing the alignments and mapping gene structures onto protein structures.
    Hammesfahr B; Odronitz F; Mühlhausen S; Waack S; Kollmar M
    BMC Bioinformatics; 2013 Mar; 14():77. PubMed ID: 23496949
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Evolutionary Study of Disorder in Protein Sequences.
    Kastano K; Erdős G; Mier P; Alanis-Lobato G; Promponas VJ; Dosztányi Z; Andrade-Navarro MA
    Biomolecules; 2020 Oct; 10(10):. PubMed ID: 33036302
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Independent effects of alternative splicing and structural constraint on the evolution of mammalian coding exons.
    Chen FC; Pan CL; Lin HY
    Mol Biol Evol; 2012 Jan; 29(1):187-93. PubMed ID: 21795252
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Do sequence neighbours of intrinsically disordered regions promote structural flexibility in intrinsically disordered proteins?
    Basu S; Bahadur RP
    J Struct Biol; 2020 Feb; 209(2):107428. PubMed ID: 31756456
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Intrinsic protein disorder reduces small-scale gene duplicability.
    Banerjee S; Feyertag F; Alvarez-Ponce D
    DNA Res; 2017 Aug; 24(4):435-444. PubMed ID: 28430886
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.