These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

206 related articles for article (PubMed ID: 36545790)

  • 1. spaCI: deciphering spatial cellular communications through adaptive graph model.
    Tang Z; Zhang T; Yang B; Su J; Song Q
    Brief Bioinform; 2023 Jan; 24(1):. PubMed ID: 36545790
    [TBL] [Abstract][Full Text] [Related]  

  • 2. SpaRx: Elucidate single-cell spatial heterogeneity of drug responses for personalized treatment.
    Tang Z; Liu X; Li Z; Zhang T; Yang B; Su J; Song Q
    bioRxiv; 2023 Aug; ():. PubMed ID: 37577665
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SpaRx: elucidate single-cell spatial heterogeneity of drug responses for personalized treatment.
    Tang Z; Liu X; Li Z; Zhang T; Yang B; Su J; Song Q
    Brief Bioinform; 2023 Sep; 24(6):. PubMed ID: 37798249
    [TBL] [Abstract][Full Text] [Related]  

  • 4. SD2: spatially resolved transcriptomics deconvolution through integration of dropout and spatial information.
    Li H; Li H; Zhou J; Gao X
    Bioinformatics; 2022 Oct; 38(21):4878-4884. PubMed ID: 36063455
    [TBL] [Abstract][Full Text] [Related]  

  • 5. HyperGCN: an effective deep representation learning framework for the integrative analysis of spatial transcriptomics data.
    Ma Y; Liu L; Zhao Y; Hang B; Zhang Y
    BMC Genomics; 2024 Jun; 25(1):566. PubMed ID: 38840049
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Decoding functional cell-cell communication events by multi-view graph learning on spatial transcriptomics.
    Li H; Ma T; Hao M; Guo W; Gu J; Zhang X; Wei L
    Brief Bioinform; 2023 Sep; 24(6):. PubMed ID: 37824741
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Knowledge-graph-based cell-cell communication inference for spatially resolved transcriptomic data with SpaTalk.
    Shao X; Li C; Yang H; Lu X; Liao J; Qian J; Wang K; Cheng J; Yang P; Chen H; Xu X; Fan X
    Nat Commun; 2022 Jul; 13(1):4429. PubMed ID: 35908020
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CLARIFY: cell-cell interaction and gene regulatory network refinement from spatially resolved transcriptomics.
    Bafna M; Li H; Zhang X
    Bioinformatics; 2023 Jun; 39(39 Suppl 1):i484-i493. PubMed ID: 37387180
    [TBL] [Abstract][Full Text] [Related]  

  • 9. SiGra: single-cell spatial elucidation through an image-augmented graph transformer.
    Tang Z; Li Z; Hou T; Zhang T; Yang B; Su J; Song Q
    Nat Commun; 2023 Sep; 14(1):5618. PubMed ID: 37699885
    [TBL] [Abstract][Full Text] [Related]  

  • 10. SpaNCMG: improving spatial domains identification of spatial transcriptomics using neighborhood-complementary mixed-view graph convolutional network.
    Si Z; Li H; Shang W; Zhao Y; Kong L; Long C; Zuo Y; Feng Z
    Brief Bioinform; 2024 May; 25(4):. PubMed ID: 38811360
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Characterization of a genetic mouse model of lung cancer: a promise to identify Non-Small Cell Lung Cancer therapeutic targets and biomarkers.
    Riccardo F; Arigoni M; Buson G; Zago E; Iezzi M; Longo D; Carrara M; Fiore A; Nuzzo S; Bicciato S; Nanni P; Landuzzi L; Cavallo F; Calogero R; Quaglino E
    BMC Genomics; 2014; 15 Suppl 3(Suppl 3):S1. PubMed ID: 25077564
    [TBL] [Abstract][Full Text] [Related]  

  • 12. xSiGra: Explainable model for single-cell spatial data elucidation.
    Budhkar A; Tang Z; Liu X; Zhang X; Su J; Song Q
    bioRxiv; 2024 Apr; ():. PubMed ID: 38746321
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Inferring Cell-Cell Communications from Spatially Resolved Transcriptomics Data Using a Bayesian Tweedie Model.
    Wu D; Gaskins JT; Sekula M; Datta S
    Genes (Basel); 2023 Jun; 14(7):. PubMed ID: 37510272
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SGCAST: symmetric graph convolutional auto-encoder for scalable and accurate study of spatial transcriptomics.
    Li J; Wang J; Lin Z
    Brief Bioinform; 2023 Nov; 25(1):. PubMed ID: 38171928
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Graph deep learning enabled spatial domains identification for spatial transcriptomics.
    Liu T; Fang ZY; Li X; Zhang LN; Cao DS; Yin MZ
    Brief Bioinform; 2023 May; 24(3):. PubMed ID: 37080761
    [TBL] [Abstract][Full Text] [Related]  

  • 16. An immune gene expression signature distinguishes central nervous system metastases from primary tumours in non-small-cell lung cancer.
    Tsakonas G; Lewensohn R; Botling J; Ortiz-Villalon C; Micke P; Friesland S; Nord H; Lindskog M; Sandelin M; Hydbring P; Ekman S
    Eur J Cancer; 2020 Jun; 132():24-34. PubMed ID: 32325417
    [TBL] [Abstract][Full Text] [Related]  

  • 17. CellNeighborEX: deciphering neighbor-dependent gene expression from spatial transcriptomics data.
    Kim H; Kumar A; Lövkvist C; Palma AM; Martin P; Kim J; Bhoopathi P; Trevino J; Fisher P; Madan E; Gogna R; Won KJ
    Mol Syst Biol; 2023 Nov; 19(11):e11670. PubMed ID: 37815040
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Single-cell genomics and spatial transcriptomics: Discovery of novel cell states and cellular interactions in liver physiology and disease biology.
    Saviano A; Henderson NC; Baumert TF
    J Hepatol; 2020 Nov; 73(5):1219-1230. PubMed ID: 32534107
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Screening cell-cell communication in spatial transcriptomics via collective optimal transport.
    Cang Z; Zhao Y; Almet AA; Stabell A; Ramos R; Plikus MV; Atwood SX; Nie Q
    Nat Methods; 2023 Feb; 20(2):218-228. PubMed ID: 36690742
    [TBL] [Abstract][Full Text] [Related]  

  • 20. STellaris: a web server for accurate spatial mapping of single cells based on spatial transcriptomics data.
    Li X; Xiao C; Qi J; Xue W; Xu X; Mu Z; Zhang J; Li CY; Ding W
    Nucleic Acids Res; 2023 Jul; 51(W1):W560-W568. PubMed ID: 37224539
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.