These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 36564857)

  • 21. DeepECA: an end-to-end learning framework for protein contact prediction from a multiple sequence alignment.
    Fukuda H; Tomii K
    BMC Bioinformatics; 2020 Jan; 21(1):10. PubMed ID: 31918654
    [TBL] [Abstract][Full Text] [Related]  

  • 22. End-to-End Protein Normal Mode Frequency Predictions Using Language and Graph Models and Application to Sonification.
    Hu Y; Buehler MJ
    ACS Nano; 2022 Dec; 16(12):20656-20670. PubMed ID: 36416536
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Generative power of a protein language model trained on multiple sequence alignments.
    Sgarbossa D; Lupo U; Bitbol AF
    Elife; 2023 Feb; 12():. PubMed ID: 36734516
    [TBL] [Abstract][Full Text] [Related]  

  • 24. High precision in protein contact prediction using fully convolutional neural networks and minimal sequence features.
    Jones DT; Kandathil SM
    Bioinformatics; 2018 Oct; 34(19):3308-3315. PubMed ID: 29718112
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Improved Protein-Ligand Binding Affinity Prediction with Structure-Based Deep Fusion Inference.
    Jones D; Kim H; Zhang X; Zemla A; Stevenson G; Bennett WFD; Kirshner D; Wong SE; Lightstone FC; Allen JE
    J Chem Inf Model; 2021 Apr; 61(4):1583-1592. PubMed ID: 33754707
    [TBL] [Abstract][Full Text] [Related]  

  • 26. ProALIGN: Directly Learning Alignments for Protein Structure Prediction via Exploiting Context-Specific Alignment Motifs.
    Kong L; Ju F; Zheng WM; Zhu J; Sun S; Xu J; Bu D
    J Comput Biol; 2022 Feb; 29(2):92-105. PubMed ID: 35073170
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Applying and improving AlphaFold at CASP14.
    Jumper J; Evans R; Pritzel A; Green T; Figurnov M; Ronneberger O; Tunyasuvunakool K; Bates R; Žídek A; Potapenko A; Bridgland A; Meyer C; Kohl SAA; Ballard AJ; Cowie A; Romera-Paredes B; Nikolov S; Jain R; Adler J; Back T; Petersen S; Reiman D; Clancy E; Zielinski M; Steinegger M; Pacholska M; Berghammer T; Silver D; Vinyals O; Senior AW; Kavukcuoglu K; Kohli P; Hassabis D
    Proteins; 2021 Dec; 89(12):1711-1721. PubMed ID: 34599769
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Cluster expansion models for flexible-backbone protein energetics.
    Apgar JR; Hahn S; Grigoryan G; Keating AE
    J Comput Chem; 2009 Nov; 30(15):2402-13. PubMed ID: 19360809
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Contrastive learning of protein representations with graph neural networks for structural and functional annotations.
    Luo J; Luo Y
    Pac Symp Biocomput; 2023; 28():109-120. PubMed ID: 36540969
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Highly accurate protein structure prediction with AlphaFold.
    Jumper J; Evans R; Pritzel A; Green T; Figurnov M; Ronneberger O; Tunyasuvunakool K; Bates R; Žídek A; Potapenko A; Bridgland A; Meyer C; Kohl SAA; Ballard AJ; Cowie A; Romera-Paredes B; Nikolov S; Jain R; Adler J; Back T; Petersen S; Reiman D; Clancy E; Zielinski M; Steinegger M; Pacholska M; Berghammer T; Bodenstein S; Silver D; Vinyals O; Senior AW; Kavukcuoglu K; Kohli P; Hassabis D
    Nature; 2021 Aug; 596(7873):583-589. PubMed ID: 34265844
    [TBL] [Abstract][Full Text] [Related]  

  • 31. CNNcon: improved protein contact maps prediction using cascaded neural networks.
    Ding W; Xie J; Dai D; Zhang H; Xie H; Zhang W
    PLoS One; 2013; 8(4):e61533. PubMed ID: 23626696
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Prediction of protein supersecondary structures based on the artificial neural network method.
    Sun Z; Rao X; Peng L; Xu D
    Protein Eng; 1997 Jul; 10(7):763-9. PubMed ID: 9342142
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Predicting residue-specific qualities of individual protein models using residual neural networks and graph neural networks.
    Zhao C; Liu T; Wang Z
    Proteins; 2022 Dec; 90(12):2091-2102. PubMed ID: 35842895
    [TBL] [Abstract][Full Text] [Related]  

  • 34. A novel approach to prediction of the 3-dimensional structures of protein backbones by neural networks.
    Bohr H; Bohr J; Brunak S; Cotterill RM; Fredholm H; Lautrup B; Petersen SB
    FEBS Lett; 1990 Feb; 261(1):43-6. PubMed ID: 19928342
    [TBL] [Abstract][Full Text] [Related]  

  • 35. FALCON2: a web server for high-quality prediction of protein tertiary structures.
    Kong L; Ju F; Zhang H; Sun S; Bu D
    BMC Bioinformatics; 2021 Sep; 22(1):439. PubMed ID: 34525939
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Computational design of high-affinity epitope scaffolds by backbone grafting of a linear epitope.
    Azoitei ML; Ban YE; Julien JP; Bryson S; Schroeter A; Kalyuzhniy O; Porter JR; Adachi Y; Baker D; Pai EF; Schief WR
    J Mol Biol; 2012 Jan; 415(1):175-92. PubMed ID: 22061265
    [TBL] [Abstract][Full Text] [Related]  

  • 37. ProDCoNN: Protein design using a convolutional neural network.
    Zhang Y; Chen Y; Wang C; Lo CC; Liu X; Wu W; Zhang J
    Proteins; 2020 Jul; 88(7):819-829. PubMed ID: 31867753
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.
    Crider K; Williams J; Qi YP; Gutman J; Yeung L; Mai C; Finkelstain J; Mehta S; Pons-Duran C; Menéndez C; Moraleda C; Rogers L; Daniels K; Green P
    Cochrane Database Syst Rev; 2022 Feb; 2(2022):. PubMed ID: 36321557
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Rosetta:MSF:NN: Boosting performance of multi-state computational protein design with a neural network.
    Nazet J; Lang E; Merkl R
    PLoS One; 2021; 16(8):e0256691. PubMed ID: 34437621
    [TBL] [Abstract][Full Text] [Related]  

  • 40. RosettaAntibodyDesign (RAbD): A general framework for computational antibody design.
    Adolf-Bryfogle J; Kalyuzhniy O; Kubitz M; Weitzner BD; Hu X; Adachi Y; Schief WR; Dunbrack RL
    PLoS Comput Biol; 2018 Apr; 14(4):e1006112. PubMed ID: 29702641
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.