These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

191 related articles for article (PubMed ID: 36576010)

  • 21. Multi-allele species reconstruction using ASTRAL.
    Rabiee M; Sayyari E; Mirarab S
    Mol Phylogenet Evol; 2019 Jan; 130():286-296. PubMed ID: 30393186
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Quintet Rooting: rooting species trees under the multi-species coalescent model.
    Tabatabaee Y; Sarker K; Warnow T
    Bioinformatics; 2022 Jun; 38(Suppl 1):i109-i117. PubMed ID: 35758805
    [TBL] [Abstract][Full Text] [Related]  

  • 23. STELLS2: fast and accurate coalescent-based maximum likelihood inference of species trees from gene tree topologies.
    Pei J; Wu Y
    Bioinformatics; 2017 Jun; 33(12):1789-1797. PubMed ID: 28186220
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss.
    Legried B; Molloy EK; Warnow T; Roch S
    J Comput Biol; 2021 May; 28(5):452-468. PubMed ID: 33325781
    [TBL] [Abstract][Full Text] [Related]  

  • 25. FASTRAL: improving scalability of phylogenomic analysis.
    Dibaeinia P; Tabe-Bordbar S; Warnow T
    Bioinformatics; 2021 Aug; 37(16):2317-2324. PubMed ID: 33576396
    [TBL] [Abstract][Full Text] [Related]  

  • 26. ASTRAL-MP: scaling ASTRAL to very large datasets using randomization and parallelization.
    Yin J; Zhang C; Mirarab S
    Bioinformatics; 2019 Oct; 35(20):3961-3969. PubMed ID: 30903685
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Inferring rooted species trees from unrooted gene trees using approximate Bayesian computation.
    Alanzi ARA; Degnan JH
    Mol Phylogenet Evol; 2017 Nov; 116():13-24. PubMed ID: 28780022
    [TBL] [Abstract][Full Text] [Related]  

  • 28. AleRax: a tool for gene and species tree co-estimation and reconciliation under a probabilistic model of gene duplication, transfer, and loss.
    Morel B; Williams TA; Stamatakis A; Szöllősi GJ
    Bioinformatics; 2024 Mar; 40(4):. PubMed ID: 38514421
    [TBL] [Abstract][Full Text] [Related]  

  • 29. NetRAX: accurate and fast maximum likelihood phylogenetic network inference.
    Lutteropp S; Scornavacca C; Kozlov AM; Morel B; Stamatakis A
    Bioinformatics; 2022 Aug; 38(15):3725-3733. PubMed ID: 35713506
    [TBL] [Abstract][Full Text] [Related]  

  • 30. STELAR: a statistically consistent coalescent-based species tree estimation method by maximizing triplet consistency.
    Islam M; Sarker K; Das T; Reaz R; Bayzid MS
    BMC Genomics; 2020 Feb; 21(1):136. PubMed ID: 32039704
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Estimating optimal species trees from incomplete gene trees under deep coalescence.
    Bayzid MS; Warnow T
    J Comput Biol; 2012 Jun; 19(6):591-605. PubMed ID: 22697236
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Theoretical and Practical Considerations when using Retroelement Insertions to Estimate Species Trees in the Anomaly Zone.
    Molloy EK; Gatesy J; Springer MS
    Syst Biol; 2022 Apr; 71(3):721-740. PubMed ID: 34677617
    [TBL] [Abstract][Full Text] [Related]  

  • 33. imPhy: Imputing Phylogenetic Trees with Missing Information Using Mathematical Programming.
    Yasui N; Vogiatzis C; Yoshida R; Fukumizu K
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(4):1222-1230. PubMed ID: 30507538
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Phylogenomic species tree estimation in the presence of incomplete lineage sorting and horizontal gene transfer.
    Davidson R; Vachaspati P; Mirarab S; Warnow T
    BMC Genomics; 2015; 16 Suppl 10(Suppl 10):S1. PubMed ID: 26450506
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Statistical inconsistency of the unrooted minimize deep coalescence criterion.
    Alanzi AAR; Degnan JH
    PLoS One; 2021; 16(5):e0251107. PubMed ID: 33970931
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Bayesian-Weighted Triplet and Quartet Methods for Species Tree Inference.
    Richards A; Kubatko L
    Bull Math Biol; 2021 Jul; 83(9):93. PubMed ID: 34297209
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Trying out a million genes to find the perfect pair with RTIST.
    Zhelezov G; Degnan JH
    Bioinformatics; 2022 Jul; 38(14):3565-3573. PubMed ID: 35641003
    [TBL] [Abstract][Full Text] [Related]  

  • 38. IDXL: Species Tree Inference Using Internode Distance and Excess Gene Leaf Count.
    Bhattacharyya S; Mukherjee J
    J Mol Evol; 2017 Aug; 85(1-2):57-78. PubMed ID: 28835989
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Species Tree Estimation from Gene Trees by Minimizing Deep Coalescence and Maximizing Quartet Consistency: A Comparative Study and the Presence of Pseudo Species Tree Terraces.
    Farah IT; Islam M; Zinat KT; Rahman AH; Bayzid S
    Syst Biol; 2021 Oct; 70(6):1213-1231. PubMed ID: 33844023
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data.
    Mahbub S; Sawmya S; Saha A; Reaz R; Rahman MS; Bayzid MS
    J Comput Biol; 2022 Nov; 29(11):1156-1172. PubMed ID: 36048555
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.