These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
123 related articles for article (PubMed ID: 3663607)
41. Thermodynamics of RNA duplexes with tandem mismatches containing a uracil-uracil pair flanked by C.G/G.C or G.C/A.U closing base pairs. Bourdélat-Parks BN; Wartell RM Biochemistry; 2005 Dec; 44(50):16710-7. PubMed ID: 16342961 [TBL] [Abstract][Full Text] [Related]
43. Improved Model for Predicting the Free Energy Contribution of Dinucleotide Bulges to RNA Duplex Stability. Tomcho JC; Tillman MR; Znosko BM Biochemistry; 2015 Sep; 54(34):5290-6. PubMed ID: 26286708 [TBL] [Abstract][Full Text] [Related]
44. Origins of the large differences in stability of DNA and RNA helices: C-5 methyl and 2'-hydroxyl effects. Wang S; Kool ET Biochemistry; 1995 Mar; 34(12):4125-32. PubMed ID: 7535100 [TBL] [Abstract][Full Text] [Related]
45. Stabilities of nucleotide loops bridging the pyrimidine strands in DNA pyrimidine.purine.pyrimidine triplexes: special stability of the CTTTG loop. Wang S; Booher MA; Kool ET Biochemistry; 1994 Apr; 33(15):4639-44. PubMed ID: 8161520 [TBL] [Abstract][Full Text] [Related]
46. Parallel-stranded duplex DNA containing blocks of trans purine-purine and purine-pyrimidine base pairs. Evertsz EM; Rippe K; Jovin TM Nucleic Acids Res; 1994 Aug; 22(16):3293-303. PubMed ID: 8078763 [TBL] [Abstract][Full Text] [Related]
47. The dynamic structural basis of differential enhancement of conformational stability by 5'- and 3'-dangling ends in RNA. Liu JD; Zhao L; Xia T Biochemistry; 2008 Jun; 47(22):5962-75. PubMed ID: 18457418 [TBL] [Abstract][Full Text] [Related]
48. Solution structure of a GA mismatch DNA sequence, d(CCATGAATGG)2, determined by 2D NMR and structural refinement methods. Greene KL; Jones RL; Li Y; Robinson H; Wang AH; Zon G; Wilson WD Biochemistry; 1994 Feb; 33(5):1053-62. PubMed ID: 8110736 [TBL] [Abstract][Full Text] [Related]
49. Thermodynamics of double- and triple-helical aggregates formed by self-complementary oligoribonucleotides of the type rAxUy. Ohms J; Ackermann T Biochemistry; 1990 Jun; 29(22):5237-44. PubMed ID: 2383543 [TBL] [Abstract][Full Text] [Related]
50. Specific recognition of CG base pairs by 2-deoxynebularine within the purine.purine.pyrimidine triple-helix motif. Stilz HU; Dervan PB Biochemistry; 1993 Mar; 32(9):2177-85. PubMed ID: 8443159 [TBL] [Abstract][Full Text] [Related]
51. Dangling ends perturb the stability of RNA duplexes responsive to surrounding conditions. Tateishi-Karimata H; Pramanik S; Nakano S; Miyoshi D; Sugimoto N ChemMedChem; 2014 Sep; 9(9):2150-5. PubMed ID: 25070089 [TBL] [Abstract][Full Text] [Related]
52. Nearest-neighbor parameters for G.U mismatches: [formula; see text] is destabilizing in the contexts [formula; see text] and [formula; see text] but stabilizing in [formula; see text]. He L; Kierzek R; SantaLucia J; Walter AE; Turner DH Biochemistry; 1991 Nov; 30(46):11124-32. PubMed ID: 1718426 [TBL] [Abstract][Full Text] [Related]
53. Prediction of the stability of DNA triplexes. Roberts RW; Crothers DM Proc Natl Acad Sci U S A; 1996 Apr; 93(9):4320-5. PubMed ID: 8633063 [TBL] [Abstract][Full Text] [Related]
54. Nearest-neighbor thermodynamics of internal A.C mismatches in DNA: sequence dependence and pH effects. Allawi HT; SantaLucia J Biochemistry; 1998 Jun; 37(26):9435-44. PubMed ID: 9649326 [TBL] [Abstract][Full Text] [Related]
55. Thermodynamic parameters for DNA sequences with dangling ends. Bommarito S; Peyret N; SantaLucia J Nucleic Acids Res; 2000 May; 28(9):1929-34. PubMed ID: 10756193 [TBL] [Abstract][Full Text] [Related]
56. Factors affecting the thermodynamic stability of small asymmetric internal loops in RNA. Schroeder SJ; Turner DH Biochemistry; 2000 Aug; 39(31):9257-74. PubMed ID: 10924119 [TBL] [Abstract][Full Text] [Related]
57. Conformational determinants of tandem GU mismatches in RNA: insights from molecular dynamics simulations and quantum mechanical calculations. Pan Y; Priyakumar UD; MacKerell AD Biochemistry; 2005 Feb; 44(5):1433-43. PubMed ID: 15683228 [TBL] [Abstract][Full Text] [Related]
58. Polymer-supported RNA synthesis and its application to test the nearest-neighbor model for duplex stability. Kierzek R; Caruthers MH; Longfellow CE; Swinton D; Turner DH; Freier SM Biochemistry; 1986 Dec; 25(24):7840-6. PubMed ID: 2432933 [TBL] [Abstract][Full Text] [Related]
59. Strong, specific, monodentate G-C base pair recognition by N7-inosine derivatives in the pyrimidine.purine-pyrimidine triple-helical binding motif. Marfurt J; Parel SP; Leumann CJ Nucleic Acids Res; 1997 May; 25(10):1875-82. PubMed ID: 9115352 [TBL] [Abstract][Full Text] [Related]
60. Thermodynamic analyses of purine motif triplex DNA formation. Torigoe H; Katayama T; Umegaki Y Nucleic Acids Res Suppl; 2003; (3):159-60. PubMed ID: 14510429 [TBL] [Abstract][Full Text] [Related] [Previous] [Next] [New Search]