233 related articles for article (PubMed ID: 36640767)
1. Machine learning dissection of human accelerated regions in primate neurodevelopment.
Whalen S; Inoue F; Ryu H; Fair T; Markenscoff-Papadimitriou E; Keough K; Kircher M; Martin B; Alvarado B; Elor O; Laboy Cintron D; Williams A; Hassan Samee MA; Thomas S; Krencik R; Ullian EM; Kriegstein A; Rubenstein JL; Shendure J; Pollen AA; Ahituv N; Pollard KS
Neuron; 2023 Mar; 111(6):857-873.e8. PubMed ID: 36640767
[TBL] [Abstract][Full Text] [Related]
2. Massively parallel discovery of human-specific substitutions that alter enhancer activity.
Uebbing S; Gockley J; Reilly SK; Kocher AA; Geller E; Gandotra N; Scharfe C; Cotney J; Noonan JP
Proc Natl Acad Sci U S A; 2021 Jan; 118(2):. PubMed ID: 33372131
[TBL] [Abstract][Full Text] [Related]
3. Rewiring of human neurodevelopmental gene regulatory programs by human accelerated regions.
Girskis KM; Stergachis AB; DeGennaro EM; Doan RN; Qian X; Johnson MB; Wang PP; Sejourne GM; Nagy MA; Pollina EA; Sousa AMM; Shin T; Kenny CJ; Scotellaro JL; Debo BM; Gonzalez DM; Rento LM; Yeh RC; Song JHT; Beaudin M; Fan J; Kharchenko PV; Sestan N; Greenberg ME; Walsh CA
Neuron; 2021 Oct; 109(20):3239-3251.e7. PubMed ID: 34478631
[TBL] [Abstract][Full Text] [Related]
4. Enhancer Function and Evolutionary Roles of Human Accelerated Regions.
Whalen S; Pollard KS
Annu Rev Genet; 2022 Nov; 56():423-439. PubMed ID: 36070559
[TBL] [Abstract][Full Text] [Related]
5. Three-dimensional genome rewiring in loci with human accelerated regions.
Keough KC; Whalen S; Inoue F; Przytycki PF; Fair T; Deng C; Steyert M; Ryu H; Lindblad-Toh K; Karlsson E; ; Nowakowski T; Ahituv N; Pollen A; Pollard KS
Science; 2023 Apr; 380(6643):eabm1696. PubMed ID: 37104607
[TBL] [Abstract][Full Text] [Related]
6. Accelerated evolution in the human lineage led to gain and loss of transcriptional enhancers in the
Berasain L; Beati P; Trigila AP; Rubinstein M; Franchini LF
Sci Adv; 2024 Jun; 10(26):eadl1049. PubMed ID: 38924416
[TBL] [Abstract][Full Text] [Related]
7. Many human accelerated regions are developmental enhancers.
Capra JA; Erwin GD; McKinsey G; Rubenstein JL; Pollard KS
Philos Trans R Soc Lond B Biol Sci; 2013 Dec; 368(1632):20130025. PubMed ID: 24218637
[TBL] [Abstract][Full Text] [Related]
8. Identification and Massively Parallel Characterization of Regulatory Elements Driving Neural Induction.
Inoue F; Kreimer A; Ashuach T; Ahituv N; Yosef N
Cell Stem Cell; 2019 Nov; 25(5):713-727.e10. PubMed ID: 31631012
[TBL] [Abstract][Full Text] [Related]
9. A Systematic Review of the Human Accelerated Regions in Schizophrenia and Related Disorders: Where the Evolutionary and Neurodevelopmental Hypotheses Converge.
Guardiola-Ripoll M; Fatjó-Vilas M
Int J Mol Sci; 2023 Feb; 24(4):. PubMed ID: 36835010
[TBL] [Abstract][Full Text] [Related]
10. Mutations in Human Accelerated Regions Disrupt Cognition and Social Behavior.
Doan RN; Bae BI; Cubelos B; Chang C; Hossain AA; Al-Saad S; Mukaddes NM; Oner O; Al-Saffar M; Balkhy S; Gascon GG; ; Nieto M; Walsh CA
Cell; 2016 Oct; 167(2):341-354.e12. PubMed ID: 27667684
[TBL] [Abstract][Full Text] [Related]
11. Systematic dissection of regulatory motifs in 2000 predicted human enhancers using a massively parallel reporter assay.
Kheradpour P; Ernst J; Melnikov A; Rogov P; Wang L; Zhang X; Alston J; Mikkelsen TS; Kellis M
Genome Res; 2013 May; 23(5):800-11. PubMed ID: 23512712
[TBL] [Abstract][Full Text] [Related]
12. Cell-type-specific
Wang B; Starr AL; Fraser HB
Elife; 2024 Feb; 12():. PubMed ID: 38358392
[TBL] [Abstract][Full Text] [Related]
13. Genetic variations in evolutionary accelerated regions disrupt cognition in schizophrenia.
Bhattacharyya U; Bhatia T; Deshpande SN; Thelma BK
Psychiatry Res; 2022 Aug; 314():114586. PubMed ID: 35623238
[TBL] [Abstract][Full Text] [Related]
14. Predicting functional variants in enhancer and promoter elements using RegulomeDB.
Dong S; Boyle AP
Hum Mutat; 2019 Sep; 40(9):1292-1298. PubMed ID: 31228310
[TBL] [Abstract][Full Text] [Related]
15. Systematic dissection and optimization of inducible enhancers in human cells using a massively parallel reporter assay.
Melnikov A; Murugan A; Zhang X; Tesileanu T; Wang L; Rogov P; Feizi S; Gnirke A; Callan CG; Kinney JB; Kellis M; Lander ES; Mikkelsen TS
Nat Biotechnol; 2012 Feb; 30(3):271-7. PubMed ID: 22371084
[TBL] [Abstract][Full Text] [Related]
16. Nucleome Dynamics during Retinal Development.
Norrie JL; Lupo MS; Xu B; Al Diri I; Valentine M; Putnam D; Griffiths L; Zhang J; Johnson D; Easton J; Shao Y; Honnell V; Frase S; Miller S; Stewart V; Zhou X; Chen X; Dyer MA
Neuron; 2019 Nov; 104(3):512-528.e11. PubMed ID: 31493975
[TBL] [Abstract][Full Text] [Related]
17. Massively parallel disruption of enhancers active in human neural stem cells.
Geller E; Noble MA; Morales M; Gockley J; Emera D; Uebbing S; Cotney JL; Noonan JP
Cell Rep; 2024 Feb; 43(2):113693. PubMed ID: 38271204
[TBL] [Abstract][Full Text] [Related]
18. Integration of multiple epigenomic marks improves prediction of variant impact in saturation mutagenesis reporter assay.
Shigaki D; Adato O; Adhikari AN; Dong S; Hawkins-Hooker A; Inoue F; Juven-Gershon T; Kenlay H; Martin B; Patra A; Penzar DD; Schubach M; Xiong C; Yan Z; Boyle AP; Kreimer A; Kulakovskiy IV; Reid J; Unger R; Yosef N; Shendure J; Ahituv N; Kircher M; Beer MA
Hum Mutat; 2019 Sep; 40(9):1280-1291. PubMed ID: 31106481
[TBL] [Abstract][Full Text] [Related]
19. Inferring mammalian tissue-specific regulatory conservation by predicting tissue-specific differences in open chromatin.
Kaplow IM; Schäffer DE; Wirthlin ME; Lawler AJ; Brown AR; Kleyman M; Pfenning AR
BMC Genomics; 2022 Apr; 23(1):291. PubMed ID: 35410163
[TBL] [Abstract][Full Text] [Related]
20. A Chromatin Accessibility Atlas of the Developing Human Telencephalon.
Markenscoff-Papadimitriou E; Whalen S; Przytycki P; Thomas R; Binyameen F; Nowakowski TJ; Kriegstein AR; Sanders SJ; State MW; Pollard KS; Rubenstein JL
Cell; 2020 Aug; 182(3):754-769.e18. PubMed ID: 32610082
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]