252 related articles for article (PubMed ID: 36641214)
1. Combining small angle X-ray scattering (SAXS) with protein structure predictions to characterize conformations in solution.
Chinnam NB; Syed A; Hura GL; Hammel M; Tainer JA; Tsutakawa SE
Methods Enzymol; 2023; 678():351-376. PubMed ID: 36641214
[TBL] [Abstract][Full Text] [Related]
2. Small angle X-ray scattering and cross-linking for data assisted protein structure prediction in CASP 12 with prospects for improved accuracy.
Ogorzalek TL; Hura GL; Belsom A; Burnett KH; Kryshtafovych A; Tainer JA; Rappsilber J; Tsutakawa SE; Fidelis K
Proteins; 2018 Mar; 86 Suppl 1(Suppl 1):202-214. PubMed ID: 29314274
[TBL] [Abstract][Full Text] [Related]
3. Small angle X-ray scattering-assisted protein structure prediction in CASP13 and emergence of solution structure differences.
Hura GL; Hodge CD; Rosenberg D; Guzenko D; Duarte JM; Monastyrskyy B; Grudinin S; Kryshtafovych A; Tainer JA; Fidelis K; Tsutakawa SE
Proteins; 2019 Dec; 87(12):1298-1314. PubMed ID: 31589784
[TBL] [Abstract][Full Text] [Related]
4. Universally Accessible Structural Data on Macromolecular Conformation, Assembly, and Dynamics by Small Angle X-Ray Scattering for DNA Repair Insights.
Chinnam NB; Syed A; Burnett KH; Hura GL; Tainer JA; Tsutakawa SE
Methods Mol Biol; 2022; 2444():43-68. PubMed ID: 35290631
[TBL] [Abstract][Full Text] [Related]
5. Hybrid Methods for Modeling Protein Structures Using Molecular Dynamics Simulations and Small-Angle X-Ray Scattering Data.
Ekimoto T; Ikeguchi M
Adv Exp Med Biol; 2018; 1105():237-258. PubMed ID: 30617833
[TBL] [Abstract][Full Text] [Related]
6. Multi-state modeling of antibody-antigen complexes with SAXS profiles and deep-learning models.
Cohen T; Halfon M; Carter L; Sharkey B; Jain T; Sivasubramanian A; Schneidman-Duhovny D
Methods Enzymol; 2023; 678():237-262. PubMed ID: 36641210
[TBL] [Abstract][Full Text] [Related]
7. Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography.
Tsutakawa SE; Hura GL; Frankel KA; Cooper PK; Tainer JA
J Struct Biol; 2007 May; 158(2):214-23. PubMed ID: 17182256
[TBL] [Abstract][Full Text] [Related]
8. Accurate SAXS profile computation and its assessment by contrast variation experiments.
Schneidman-Duhovny D; Hammel M; Tainer JA; Sali A
Biophys J; 2013 Aug; 105(4):962-74. PubMed ID: 23972848
[TBL] [Abstract][Full Text] [Related]
9. Structure modeling from small angle X-ray scattering data with elastic network normal mode analysis.
Miyashita O; Gorba C; Tama F
J Struct Biol; 2011 Mar; 173(3):451-60. PubMed ID: 20850542
[TBL] [Abstract][Full Text] [Related]
10. A practical guide to small angle X-ray scattering (SAXS) of flexible and intrinsically disordered proteins.
Kikhney AG; Svergun DI
FEBS Lett; 2015 Sep; 589(19 Pt A):2570-7. PubMed ID: 26320411
[TBL] [Abstract][Full Text] [Related]
11. SAXSDom: Modeling multidomain protein structures using small-angle X-ray scattering data.
Hou J; Adhikari B; Tanner JJ; Cheng J
Proteins; 2020 Jun; 88(6):775-787. PubMed ID: 31860156
[TBL] [Abstract][Full Text] [Related]
12. Use of small angle X-ray scattering (SAXS) to characterize conformational states of functional RNAs.
Doniach S; Lipfert J
Methods Enzymol; 2009; 469():237-51. PubMed ID: 20946792
[TBL] [Abstract][Full Text] [Related]
13. Assessment of data-assisted prediction by inclusion of crosslinking/mass-spectrometry and small angle X-ray scattering data in the 12
Tamò GE; Abriata LA; Fonti G; Dal Peraro M
Proteins; 2018 Mar; 86 Suppl 1():215-227. PubMed ID: 29235142
[TBL] [Abstract][Full Text] [Related]
14. Structural interpretations of a flexible cold-active AMS8 lipase by combining small-angle X-ray scattering and molecular dynamics simulation (SAXS-MD).
Yaacob N; Kamonsutthipaijit N; Soontaranon S; Leow TC; Rahman RNZRA; Ali MSM
Int J Biol Macromol; 2022 Nov; 220():1095-1103. PubMed ID: 36029961
[TBL] [Abstract][Full Text] [Related]
15. Using Small Angle X-Ray Scattering (SAXS) to Characterize the Solution Conformation and Flexibility of Matrix Metalloproteinases (MMPs).
Butt LE; Holland RA; Khunti NS; Quinn DL; Pickford AR
Methods Mol Biol; 2017; 1579():87-108. PubMed ID: 28299734
[TBL] [Abstract][Full Text] [Related]
16. Integrative structural modeling with small angle X-ray scattering profiles.
Schneidman-Duhovny D; Kim SJ; Sali A
BMC Struct Biol; 2012 Jul; 12():17. PubMed ID: 22800408
[TBL] [Abstract][Full Text] [Related]
17. Validation of macromolecular flexibility in solution by small-angle X-ray scattering (SAXS).
Hammel M
Eur Biophys J; 2012 Oct; 41(10):789-99. PubMed ID: 22639100
[TBL] [Abstract][Full Text] [Related]
18. Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering.
Bernadó P; Svergun DI
Mol Biosyst; 2012 Jan; 8(1):151-67. PubMed ID: 21947276
[TBL] [Abstract][Full Text] [Related]
19. Structure and flexibility within proteins as identified through small angle X-ray scattering.
Pelikan M; Hura GL; Hammel M
Gen Physiol Biophys; 2009 Jun; 28(2):174-89. PubMed ID: 19592714
[TBL] [Abstract][Full Text] [Related]
20. Structural Analyses of Intrinsically Disordered Proteins by Small-Angle X-Ray Scattering.
Sagar A; Svergun D; Bernadó P
Methods Mol Biol; 2020; 2141():249-269. PubMed ID: 32696361
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]