These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
3. Visualization and co-registration of correlative microscopy data with the ImageJ plug-in Correlia. Schmidt M; Rohde F; Braumann UD Methods Cell Biol; 2021; 162():353-388. PubMed ID: 33707019 [TBL] [Abstract][Full Text] [Related]
4. VolumePeeler: a novel FIJI plugin for geometric tissue peeling to improve visualization and quantification of 3D image stacks. Gatica M; Navarro CF; Lavado A; Reig G; Pulgar E; Llanos P; Härtel S; Ravasio A; Bertocchi C; Concha ML; Cerda M BMC Bioinformatics; 2023 Jul; 24(1):283. PubMed ID: 37438714 [TBL] [Abstract][Full Text] [Related]
5. Image processing for precise three-dimensional registration and stitching of thick high-resolution laser-scanning microscopy image stacks. Murtin C; Frindel C; Rousseau D; Ito K Comput Biol Med; 2018 Jan; 92():22-41. PubMed ID: 29145044 [TBL] [Abstract][Full Text] [Related]
6. Three and Four-Dimensional Visualization and Analysis Approaches to Study Vertebrate Axial Elongation and Segmentation. Dias A; Martins GG; Lopes A; Mallo M J Vis Exp; 2021 Feb; (168):. PubMed ID: 33720141 [TBL] [Abstract][Full Text] [Related]
7. DeepOrganNet: On-the-Fly Reconstruction and Visualization of 3D / 4D Lung Models from Single-View Projections by Deep Deformation Network. Wang Y; Zhong Z; Hua J IEEE Trans Vis Comput Graph; 2020 Jan; 26(1):960-970. PubMed ID: 31442979 [TBL] [Abstract][Full Text] [Related]
8. An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images. Haass-Koffler CL; Naeemuddin M; Bartlett SE J Vis Exp; 2012 Aug; (66):e4233. PubMed ID: 22951512 [TBL] [Abstract][Full Text] [Related]
10. GIANI - open-source software for automated analysis of 3D microscopy images. Barry DJ; Gerri C; Bell DM; D'Antuono R; Niakan KK J Cell Sci; 2022 May; 135(10):. PubMed ID: 35502739 [TBL] [Abstract][Full Text] [Related]
11. 3D drift correction for super-resolution imaging with a single laser light. Li Y; He Y; Fang K; Zhou L; Wang Z; Shi W; Li Y Opt Lett; 2024 May; 49(10):2785-2788. PubMed ID: 38748161 [TBL] [Abstract][Full Text] [Related]
12. Data Science for Health Image Alignment: A User-Friendly Open-Source ImageJ/Fiji Plugin for Aligning Multimodality/Immunohistochemistry/Immunofluorescence 2D Microscopy Images. Piccinini F; Tazzari M; Tumedei MM; Stellato M; Remondini D; Giampieri E; Martinelli G; Castellani G; Carbonaro A Sensors (Basel); 2024 Jan; 24(2):. PubMed ID: 38257548 [TBL] [Abstract][Full Text] [Related]
14. High-throughput widefield fluorescence imaging of 3D samples using deep learning for 2D projection image restoration. Forsgren E; Edlund C; Oliver M; Barnes K; Sjögren R; Jackson TR PLoS One; 2022; 17(5):e0264241. PubMed ID: 35588399 [TBL] [Abstract][Full Text] [Related]
15. A BaSiC tool for background and shading correction of optical microscopy images. Peng T; Thorn K; Schroeder T; Wang L; Theis FJ; Marr C; Navab N Nat Commun; 2017 Jun; 8():14836. PubMed ID: 28594001 [TBL] [Abstract][Full Text] [Related]
16. A two-channel four-dimensional image recording and viewing system with automatic drift correction. Bürglin TR J Microsc; 2000 Oct; 200(Pt 1):75-80. PubMed ID: 11012831 [TBL] [Abstract][Full Text] [Related]
17. 2D-3D rigid registration to compensate for prostate motion during 3D TRUS-guided biopsy. De Silva T; Fenster A; Cool DW; Gardi L; Romagnoli C; Samarabandu J; Ward AD Med Phys; 2013 Feb; 40(2):022904. PubMed ID: 23387775 [TBL] [Abstract][Full Text] [Related]
18. A Simple Marker-Assisted 3D Nanometer Drift Correction Method for Superresolution Microscopy. Ma H; Xu J; Jin J; Huang Y; Liu Y Biophys J; 2017 May; 112(10):2196-2208. PubMed ID: 28538156 [TBL] [Abstract][Full Text] [Related]