These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

122 related articles for article (PubMed ID: 36748312)

  • 1. Alignment, segmentation and neighborhood analysis in cyclic immunohistochemistry data using CASSATT.
    Brockman AA; Khurana R; Bartkowiak T; Thomas PL; Sivagnanam S; Betts CB; Coussens LM; Lovly CM; Irish JM; Ihrie RA
    Cytometry B Clin Cytom; 2023 Sep; 104(5):344-355. PubMed ID: 36748312
    [TBL] [Abstract][Full Text] [Related]  

  • 2. How to Build an Image-Processing Pipeline for Automating Multiparameter Histocytometry Analysis.
    Munoz-Erazo L; Schmidt AJ; Shinko D; Price KM
    Curr Protoc; 2022 Mar; 2(3):e380. PubMed ID: 35294109
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Stitching and registering highly multiplexed whole-slide images of tissues and tumors using ASHLAR.
    Muhlich JL; Chen YA; Yapp C; Russell D; Santagata S; Sorger PK
    Bioinformatics; 2022 Sep; 38(19):4613-4621. PubMed ID: 35972352
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Cytokit: a single-cell analysis toolkit for high dimensional fluorescent microscopy imaging.
    Czech E; Aksoy BA; Aksoy P; Hammerbacher J
    BMC Bioinformatics; 2019 Sep; 20(1):448. PubMed ID: 31477013
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A real-time GPU-accelerated parallelized image processor for large-scale multiplexed fluorescence microscopy data.
    Lu G; Baertsch MA; Hickey JW; Goltsev Y; Rech AJ; Mani L; Forgó E; Kong C; Jiang S; Nolan GP; Rosenthal EL
    Front Immunol; 2022; 13():981825. PubMed ID: 36211386
    [TBL] [Abstract][Full Text] [Related]  

  • 6. An open-source solution for advanced imaging flow cytometry data analysis using machine learning.
    Hennig H; Rees P; Blasi T; Kamentsky L; Hung J; Dao D; Carpenter AE; Filby A
    Methods; 2017 Jan; 112():201-210. PubMed ID: 27594698
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Quantitation of Protein Expression and Co-localization Using Multiplexed Immuno-histochemical Staining and Multispectral Imaging.
    Bauman TM; Ricke EA; Drew SA; Huang W; Ricke WA
    J Vis Exp; 2016 Apr; (110):. PubMed ID: 27167094
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Integrated Cytometry With Machine Learning Applied to High-Content Imaging of Human Kidney Tissue for In Situ Cell Classification and Neighborhood Analysis.
    Winfree S; McNutt AT; Khochare S; Borgard TJ; Barwinska D; Sabo AR; Ferkowicz MJ; Williams JC; Lingeman JE; Gulbronson CJ; Kelly KJ; Sutton TA; Dagher PC; Eadon MT; Dunn KW; El-Achkar TM
    Lab Invest; 2023 Jun; 103(6):100104. PubMed ID: 36867975
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Semi-automatic stitching of filamentous structures in image stacks from serial-section electron tomography.
    Lindow N; Brünig FN; Dercksen VJ; Fabig G; Kiewisz R; Redemann S; Müller-Reichert T; Prohaska S; Baum D
    J Microsc; 2021 Oct; 284(1):25-44. PubMed ID: 34110027
    [TBL] [Abstract][Full Text] [Related]  

  • 10. High-Dimensional Image Analysis using Histocytometry.
    Munoz-Erazo L; Schmidt AJ; Price KM
    Curr Protoc; 2021 Jun; 1(6):e184. PubMed ID: 34165879
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A convolutional neural network for segmentation of yeast cells without manual training annotations.
    Kruitbosch HT; Mzayek Y; Omlor S; Guerra P; Milias-Argeitis A
    Bioinformatics; 2022 Feb; 38(5):1427-1433. PubMed ID: 34893817
    [TBL] [Abstract][Full Text] [Related]  

  • 12. An analytical tool that quantifies cellular morphology changes from three-dimensional fluorescence images.
    Haass-Koffler CL; Naeemuddin M; Bartlett SE
    J Vis Exp; 2012 Aug; (66):e4233. PubMed ID: 22951512
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Robust detection and segmentation of cell nuclei in biomedical images based on a computational topology framework.
    Rojas-Moraleda R; Xiong W; Halama N; Breitkopf-Heinlein K; Dooley S; Salinas L; Heermann DW; Valous NA
    Med Image Anal; 2017 May; 38():90-103. PubMed ID: 28314191
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Empirical gradient threshold technique for automated segmentation across image modalities and cell lines.
    Chalfoun J; Majurski M; Peskin A; Breen C; Bajcsy P; Brady M
    J Microsc; 2015 Oct; 260(1):86-99. PubMed ID: 26046924
    [TBL] [Abstract][Full Text] [Related]  

  • 15. ShapeMetrics: A userfriendly pipeline for 3D cell segmentation and spatial tissue analysis.
    Takko H; Pajanoja C; Kurtzeborn K; Hsin J; Kuure S; Kerosuo L
    Dev Biol; 2020 Jun; 462(1):7-19. PubMed ID: 32061886
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Applications and challenges of digital pathology and whole slide imaging.
    Higgins C
    Biotech Histochem; 2015 Jul; 90(5):341-7. PubMed ID: 25978139
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Imaging cytometry by multiparameter fluorescence.
    Galbraith W; Wagner MC; Chao J; Abaza M; Ernst LA; Nederlof MA; Hartsock RJ; Taylor DL; Waggoner AS
    Cytometry; 1991; 12(7):579-96. PubMed ID: 1782829
    [TBL] [Abstract][Full Text] [Related]  

  • 18. GIANI - open-source software for automated analysis of 3D microscopy images.
    Barry DJ; Gerri C; Bell DM; D'Antuono R; Niakan KK
    J Cell Sci; 2022 May; 135(10):. PubMed ID: 35502739
    [TBL] [Abstract][Full Text] [Related]  

  • 19. BactImAS: a platform for processing and analysis of bacterial time-lapse microscopy movies.
    Mekterović I; Mekterović D; Maglica Z
    BMC Bioinformatics; 2014 Jul; 15(1):251. PubMed ID: 25059528
    [TBL] [Abstract][Full Text] [Related]  

  • 20. fastER: a user-friendly tool for ultrafast and robust cell segmentation in large-scale microscopy.
    Hilsenbeck O; Schwarzfischer M; Loeffler D; Dimopoulos S; Hastreiter S; Marr C; Theis FJ; Schroeder T
    Bioinformatics; 2017 Jul; 33(13):2020-2028. PubMed ID: 28334115
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.