171 related articles for article (PubMed ID: 36787177)
41. Secondary structure formation of homopolymeric single-stranded nucleic acids including force and loop entropy: implications for DNA hybridization.
Einert TR; Orland H; Netz RR
Eur Phys J E Soft Matter; 2011 Jun; 34(6):55. PubMed ID: 21626368
[TBL] [Abstract][Full Text] [Related]
42. Effects of base sequence on the loop folding in DNA hairpins.
Blommers MJ; Walters JA; Haasnoot CA; Aelen JM; van der Marel GA; van Boom JH; Hilbers CW
Biochemistry; 1989 Sep; 28(18):7491-8. PubMed ID: 2819083
[TBL] [Abstract][Full Text] [Related]
43. Molecular modelling of the 3-D structure of RNA tetraloops with different nucleotide sequences.
Kajava A; Rüterjans H
Nucleic Acids Res; 1993 Sep; 21(19):4556-62. PubMed ID: 7694230
[TBL] [Abstract][Full Text] [Related]
44. Sequence-Dependent Mechanism of DNA Oligonucleotide Dehybridization Resolved through Infrared Spectroscopy.
Sanstead PJ; Stevenson P; Tokmakoff A
J Am Chem Soc; 2016 Sep; 138(36):11792-801. PubMed ID: 27519555
[TBL] [Abstract][Full Text] [Related]
45. Analysis of melting transitions of the DNA hairpins formed from the oligomer sequences d[GGATAC(X)4GTATCC] (X = A, T, G, C).
Paner TM; Amaratunga M; Doktycz MJ; Benight AS
Biopolymers; 1990 Dec; 29(14):1715-34. PubMed ID: 2207283
[TBL] [Abstract][Full Text] [Related]
46. Solution conformation of an RNA hairpin loop.
Puglisi JD; Wyatt JR; Tinoco I
Biochemistry; 1990 May; 29(17):4215-26. PubMed ID: 1694459
[TBL] [Abstract][Full Text] [Related]
47. Unfolding and melting of DNA (RNA) hairpins: the concept of structure-specific 2D dynamic landscapes.
Lin MM; Meinhold L; Shorokhov D; Zewail AH
Phys Chem Chem Phys; 2008 Aug; 10(29):4227-39. PubMed ID: 18633543
[TBL] [Abstract][Full Text] [Related]
48. Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops.
Vecenie CJ; Morrow CV; Zyra A; Serra MJ
Biochemistry; 2006 Feb; 45(5):1400-7. PubMed ID: 16445282
[TBL] [Abstract][Full Text] [Related]
49. Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.
Pley HW; Flaherty KM; McKay DB
Nature; 1994 Nov; 372(6501):111-3. PubMed ID: 7526219
[TBL] [Abstract][Full Text] [Related]
50. Non-nearest neighbor effects on the thermodynamics of unfolding of a model mRNA pseudoknot.
Theimer CA; Wang Y; Hoffman DW; Krisch HM; Giedroc DP
J Mol Biol; 1998 Jun; 279(3):545-64. PubMed ID: 9641977
[TBL] [Abstract][Full Text] [Related]
51. Secondary structure model for the last two domains of single-stranded RNA phage Q beta.
Beekwilder MJ; Nieuwenhuizen R; van Duin J
J Mol Biol; 1995 Apr; 247(5):903-17. PubMed ID: 7723040
[TBL] [Abstract][Full Text] [Related]
52. The effect of hydrostatic pressure on the thermal stability of DNA hairpins.
Amiri AR; Macgregor RB
Biophys Chem; 2011 Jun; 156(1):88-95. PubMed ID: 21392879
[TBL] [Abstract][Full Text] [Related]
53. Stability of RNA hairpin loops closed by AU base pairs.
Vecenie CJ; Serra MJ
Biochemistry; 2004 Sep; 43(37):11813-7. PubMed ID: 15362866
[TBL] [Abstract][Full Text] [Related]
54. Comparison between CUUG and UUCG tetraloops: thermodynamic stability and structural features analyzed by UV absorption and vibrational spectroscopy.
Baumruk V; Gouyette C; Huynh-Dinh T; Sun JS; Ghomi M
Nucleic Acids Res; 2001 Oct; 29(19):4089-96. PubMed ID: 11574692
[TBL] [Abstract][Full Text] [Related]
55. Perturbation of DNA hairpins containing the EcoRI recognition site by hairpin loops of varying size and composition: physical (NMR and UV) and enzymatic (EcoRI) studies.
Germann MW; Kalisch BW; Lundberg P; Vogel HJ; van de Sande JH
Nucleic Acids Res; 1990 Mar; 18(6):1489-98. PubMed ID: 2326190
[TBL] [Abstract][Full Text] [Related]
56. Melting studies of short DNA hairpins containing the universal base 5-nitroindole.
Vallone PM; Benight AS
Nucleic Acids Res; 1999 Sep; 27(17):3589-96. PubMed ID: 10446251
[TBL] [Abstract][Full Text] [Related]
57. Forced-unfolding and force-quench refolding of RNA hairpins.
Hyeon C; Thirumalai D
Biophys J; 2006 May; 90(10):3410-27. PubMed ID: 16473903
[TBL] [Abstract][Full Text] [Related]
58. Enhanced loop DNA folding induced by thymine-CH3 group contact and perpendicular guanine-thymine interaction.
Cho SH; Chin KH; Chen CW
J Biomol NMR; 2001 Jan; 19(1):33-48. PubMed ID: 11246853
[TBL] [Abstract][Full Text] [Related]
59. Rearrangement of partially ordered stacked conformations contributes to the rugged energy landscape of a small RNA hairpin.
Stancik AL; Brauns EB
Biochemistry; 2008 Oct; 47(41):10834-40. PubMed ID: 18808148
[TBL] [Abstract][Full Text] [Related]
60. A network of heterogeneous hydrogen bonds in GNRA tetraloops.
Jucker FM; Heus HA; Yip PF; Moors EH; Pardi A
J Mol Biol; 1996 Dec; 264(5):968-80. PubMed ID: 9000624
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]
