These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

136 related articles for article (PubMed ID: 36789293)

  • 41. Inconsistency of Species Tree Methods under Gene Flow.
    Solís-Lemus C; Yang M; Ané C
    Syst Biol; 2016 Sep; 65(5):843-51. PubMed ID: 27151419
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Statistical binning enables an accurate coalescent-based estimation of the avian tree.
    Mirarab S; Bayzid MS; Boussau B; Warnow T
    Science; 2014 Dec; 346(6215):1250463. PubMed ID: 25504728
    [TBL] [Abstract][Full Text] [Related]  

  • 43. FASTRAL: improving scalability of phylogenomic analysis.
    Dibaeinia P; Tabe-Bordbar S; Warnow T
    Bioinformatics; 2021 Aug; 37(16):2317-2324. PubMed ID: 33576396
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Sources of error inherent in species-tree estimation: impact of mutational and coalescent effects on accuracy and implications for choosing among different methods.
    Huang H; He Q; Kubatko LS; Knowles LL
    Syst Biol; 2010 Oct; 59(5):573-83. PubMed ID: 20833951
    [TBL] [Abstract][Full Text] [Related]  

  • 45. STELLS2: fast and accurate coalescent-based maximum likelihood inference of species trees from gene tree topologies.
    Pei J; Wu Y
    Bioinformatics; 2017 Jun; 33(12):1789-1797. PubMed ID: 28186220
    [TBL] [Abstract][Full Text] [Related]  

  • 46. Expected pairwise congruence among gene trees under the coalescent model.
    Tian Y; Kubatko LS
    Mol Phylogenet Evol; 2017 Jan; 106():144-150. PubMed ID: 27693467
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Effect of Incomplete Lineage Sorting On Tree-Reconciliation-Based Inference of Gene Duplication.
    Zheng Y; Zhang L
    IEEE/ACM Trans Comput Biol Bioinform; 2014; 11(3):477-85. PubMed ID: 26356016
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Trying out a million genes to find the perfect pair with RTIST.
    Zhelezov G; Degnan JH
    Bioinformatics; 2022 Jul; 38(14):3565-3573. PubMed ID: 35641003
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Theoretical and Practical Considerations when using Retroelement Insertions to Estimate Species Trees in the Anomaly Zone.
    Molloy EK; Gatesy J; Springer MS
    Syst Biol; 2022 Apr; 71(3):721-740. PubMed ID: 34677617
    [TBL] [Abstract][Full Text] [Related]  

  • 50. Simulation-Based Evaluation of Hybridization Network Reconstruction Methods in the Presence of Incomplete Lineage Sorting.
    Kamneva OK; Rosenberg NA
    Evol Bioinform Online; 2017; 13():1176934317691935. PubMed ID: 28469378
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Counting and sampling gene family evolutionary histories in the duplication-loss and duplication-loss-transfer models.
    Chauve C; Ponty Y; Wallner M
    J Math Biol; 2020 Apr; 80(5):1353-1388. PubMed ID: 32060618
    [TBL] [Abstract][Full Text] [Related]  

  • 52. Inferring optimal species trees under gene duplication and loss.
    Bayzid MS; Mirarab S; Warnow T
    Pac Symp Biocomput; 2013; ():250-61. PubMed ID: 23424130
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Gene tree parsimony for incomplete gene trees: addressing true biological loss.
    Bayzid MS; Warnow T
    Algorithms Mol Biol; 2018; 13():1. PubMed ID: 29387142
    [TBL] [Abstract][Full Text] [Related]  

  • 54. STELAR: a statistically consistent coalescent-based species tree estimation method by maximizing triplet consistency.
    Islam M; Sarker K; Das T; Reaz R; Bayzid MS
    BMC Genomics; 2020 Feb; 21(1):136. PubMed ID: 32039704
    [TBL] [Abstract][Full Text] [Related]  

  • 55. Gene tree rooting methods give distributions that mimic the coalescent process.
    Tian Y; Kubatko LS
    Mol Phylogenet Evol; 2014 Jan; 70():63-9. PubMed ID: 24055603
    [TBL] [Abstract][Full Text] [Related]  

  • 56. OCTAL: Optimal Completion of gene trees in polynomial time.
    Christensen S; Molloy EK; Vachaspati P; Warnow T
    Algorithms Mol Biol; 2018; 13():6. PubMed ID: 29568323
    [TBL] [Abstract][Full Text] [Related]  

  • 57. GeneRax: A Tool for Species-Tree-Aware Maximum Likelihood-Based Gene  Family Tree Inference under Gene Duplication, Transfer, and Loss.
    Morel B; Kozlov AM; Stamatakis A; Szöllősi GJ
    Mol Biol Evol; 2020 Sep; 37(9):2763-2774. PubMed ID: 32502238
    [TBL] [Abstract][Full Text] [Related]  

  • 58. Optimal gene trees from sequences and species trees using a soft interpretation of parsimony.
    Berglund-Sonnhammer AC; Steffansson P; Betts MJ; Liberles DA
    J Mol Evol; 2006 Aug; 63(2):240-50. PubMed ID: 16830091
    [TBL] [Abstract][Full Text] [Related]  

  • 59. MulRF: a software package for phylogenetic analysis using multi-copy gene trees.
    Chaudhary R; Fernández-Baca D; Burleigh JG
    Bioinformatics; 2015 Feb; 31(3):432-3. PubMed ID: 25273112
    [TBL] [Abstract][Full Text] [Related]  

  • 60. SODA: multi-locus species delimitation using quartet frequencies.
    Rabiee M; Mirarab S
    Bioinformatics; 2021 Apr; 36(24):5623-5631. PubMed ID: 33555318
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.