141 related articles for article (PubMed ID: 36802243)
1. Mechanistic Basis for a Connection between the Catalytic Step and Slow Opening Dynamics of Adenylate Kinase.
Dulko-Smith B; Ojeda-May P; Ådén J; Wolf-Watz M; Nam K
J Chem Inf Model; 2023 Mar; 63(5):1556-1569. PubMed ID: 36802243
[No Abstract] [Full Text] [Related]
2. Molecular dynamics studies on the conformational transitions of adenylate kinase: a computational evidence for the conformational selection mechanism.
Ping J; Hao P; Li YX; Wang JF
Biomed Res Int; 2013; 2013():628536. PubMed ID: 23936827
[TBL] [Abstract][Full Text] [Related]
3. Illuminating the mechanistic roles of enzyme conformational dynamics.
Hanson JA; Duderstadt K; Watkins LP; Bhattacharyya S; Brokaw J; Chu JW; Yang H
Proc Natl Acad Sci U S A; 2007 Nov; 104(46):18055-60. PubMed ID: 17989222
[TBL] [Abstract][Full Text] [Related]
4. Fine structure of conformational ensembles in adenylate kinase.
Wang Y; Makowski L
Proteins; 2018 Mar; 86(3):332-343. PubMed ID: 29239025
[TBL] [Abstract][Full Text] [Related]
5. Dynamic Connection between Enzymatic Catalysis and Collective Protein Motions.
Ojeda-May P; Mushtaq AU; Rogne P; Verma A; Ovchinnikov V; Grundström C; Dulko-Smith B; Sauer UH; Wolf-Watz M; Nam K
Biochemistry; 2021 Jul; 60(28):2246-2258. PubMed ID: 34250801
[TBL] [Abstract][Full Text] [Related]
6. Role of Repeated Conformational Transitions in Substrate Binding of Adenylate Kinase.
Lu J; Scheerer D; Haran G; Li W; Wang W
J Phys Chem B; 2022 Oct; 126(41):8188-8201. PubMed ID: 36222098
[TBL] [Abstract][Full Text] [Related]
7. Modulation of the Conformational Dynamics of Apo-Adenylate Kinase through a π-Cation Interaction.
Halder R; Manna RN; Chakraborty S; Jana B
J Phys Chem B; 2017 Jun; 121(23):5699-5708. PubMed ID: 28534408
[TBL] [Abstract][Full Text] [Related]
8. Mapping the Dynamics Landscape of Conformational Transitions in Enzyme: The Adenylate Kinase Case.
Li D; Liu MS; Ji B
Biophys J; 2015 Aug; 109(3):647-60. PubMed ID: 26244746
[TBL] [Abstract][Full Text] [Related]
9. Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Kovermann M; Ådén J; Grundström C; Sauer-Eriksson AE; Sauer UH; Wolf-Watz M
Nat Commun; 2015 Jul; 6():7644. PubMed ID: 26138143
[TBL] [Abstract][Full Text] [Related]
10. Optical Control of Cellular ATP Levels with a Photocaged Adenylate Kinase.
Zhou W; Hankinson CP; Deiters A
Chembiochem; 2020 Jul; 21(13):1832-1836. PubMed ID: 32187807
[TBL] [Abstract][Full Text] [Related]
11. Insights into Enzymatic Catalysis from Binding and Hydrolysis of Diadenosine Tetraphosphate by
Tischlik S; Oelker M; Rogne P; Sauer-Eriksson AE; Drescher M; Wolf-Watz M
Biochemistry; 2023 Aug; 62(15):2238-2243. PubMed ID: 37418448
[TBL] [Abstract][Full Text] [Related]
12. Conformational dynamics of a ligand-free adenylate kinase.
Song HD; Zhu F
PLoS One; 2013; 8(7):e68023. PubMed ID: 23861846
[TBL] [Abstract][Full Text] [Related]
13. Opening mechanism of adenylate kinase can vary according to selected molecular dynamics force field.
Unan H; Yildirim A; Tekpinar M
J Comput Aided Mol Des; 2015 Jul; 29(7):655-65. PubMed ID: 26009297
[TBL] [Abstract][Full Text] [Related]
14. Structural basis for ligand binding to an enzyme by a conformational selection pathway.
Kovermann M; Grundström C; Sauer-Eriksson AE; Sauer UH; Wolf-Watz M
Proc Natl Acad Sci U S A; 2017 Jun; 114(24):6298-6303. PubMed ID: 28559350
[TBL] [Abstract][Full Text] [Related]
15. The energy landscape of adenylate kinase during catalysis.
Kerns SJ; Agafonov RV; Cho YJ; Pontiggia F; Otten R; Pachov DV; Kutter S; Phung LA; Murphy PN; Thai V; Alber T; Hagan MF; Kern D
Nat Struct Mol Biol; 2015 Feb; 22(2):124-31. PubMed ID: 25580578
[TBL] [Abstract][Full Text] [Related]
16. Role of Protein Dynamics in Allosteric Control of the Catalytic Phosphoryl Transfer of Insulin Receptor Kinase.
Ojeda-May P; Li Y; Ovchinnikov V; Nam K
J Am Chem Soc; 2015 Oct; 137(39):12454-7. PubMed ID: 26374925
[TBL] [Abstract][Full Text] [Related]
17. Substrate Binding Specifically Modulates Domain Arrangements in Adenylate Kinase.
Zeller F; Zacharias M
Biophys J; 2015 Nov; 109(9):1978-85. PubMed ID: 26536274
[TBL] [Abstract][Full Text] [Related]
18. Role of substrate-product frustration on enzyme functional dynamics.
Kong J; Li J; Lu J; Li W; Wang W
Phys Rev E; 2019 Nov; 100(5-1):052409. PubMed ID: 31869999
[TBL] [Abstract][Full Text] [Related]
19. Zipping and unzipping of adenylate kinase: atomistic insights into the ensemble of open<-->closed transitions.
Beckstein O; Denning EJ; Perilla JR; Woolf TB
J Mol Biol; 2009 Nov; 394(1):160-76. PubMed ID: 19751742
[TBL] [Abstract][Full Text] [Related]
20. Conformational compression and barrier height heterogeneity in the N-acetylglutamate kinase.
Sanchez-Martinez M; Marcos E; Tauler R; Field M; Crehuet R
J Phys Chem B; 2013 Nov; 117(46):14261-72. PubMed ID: 24147751
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]