BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

130 related articles for article (PubMed ID: 36858110)

  • 1. RPTRF: A rapid perfect tandem repeat finder tool for DNA sequences.
    Behboudi R; Nouri-Baygi M; Naghibzadeh M
    Biosystems; 2023 Apr; 226():104869. PubMed ID: 36858110
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Exact tandem repeats analyzer (E-TRA): a new program for DNA sequence mining.
    Karaca M; Bilgen M; Onus AN; Ince AG; Elmasulu SY
    J Genet; 2005 Apr; 84(1):49-54. PubMed ID: 15876583
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Initial analysis of tandemly repetitive sequences in the genome of Zhikong scallop (Chlamys farreri Jones et Preston).
    Zhang L; Chen C; Cheng J; Wang S; Hu X; Hu J; Bao Z
    DNA Seq; 2008 Jun; 19(3):195-205. PubMed ID: 17852361
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Genome-wide analysis of tandem repeats in Daphnia pulex--a comparative approach.
    Mayer C; Leese F; Tollrian R
    BMC Genomics; 2010 Apr; 11():277. PubMed ID: 20433735
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Tandem repeats over the edit distance.
    Sokol D; Benson G; Tojeira J
    Bioinformatics; 2007 Jan; 23(2):e30-5. PubMed ID: 17237101
    [TBL] [Abstract][Full Text] [Related]  

  • 6. TRASH: Tandem Repeat Annotation and Structural Hierarchy.
    Wlodzimierz P; Hong M; Henderson IR
    Bioinformatics; 2023 May; 39(5):. PubMed ID: 37162382
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A software program combining sequence motif searches with keywords for finding repeats containing DNA sequences.
    Bilgen M; Karaca M; Onus AN; Ince AG
    Bioinformatics; 2004 Dec; 20(18):3379-86. PubMed ID: 15256410
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Identification of polymorphic tandem repeats by direct comparison of genome sequence from different bacterial strains: a web-based resource.
    Denoeud F; Vergnaud G
    BMC Bioinformatics; 2004 Jan; 5():4. PubMed ID: 14715089
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Tools for the identification of variable and potentially variable tandem repeats.
    O'Dushlaine CT; Shields DC
    BMC Genomics; 2006 Nov; 7():290. PubMed ID: 17107618
    [TBL] [Abstract][Full Text] [Related]  

  • 10. TRbase: a database relating tandem repeats to disease genes for the human genome.
    Boby T; Patch AM; Aves SJ
    Bioinformatics; 2005 Mar; 21(6):811-6. PubMed ID: 15479712
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TRStalker: an efficient heuristic for finding fuzzy tandem repeats.
    Pellegrini M; Renda ME; Vecchio A
    Bioinformatics; 2010 Jun; 26(12):i358-66. PubMed ID: 20529928
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Physical location of tandem repeats in the wheat genome and application for chromosome identification.
    Lang T; Li G; Wang H; Yu Z; Chen Q; Yang E; Fu S; Tang Z; Yang Z
    Planta; 2019 Mar; 249(3):663-675. PubMed ID: 30357506
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Advancing genomic technologies and clinical awareness accelerates discovery of disease-associated tandem repeat sequences.
    Gall-Duncan T; Sato N; Yuen RKC; Pearson CE
    Genome Res; 2022 Jan; 32(1):1-27. PubMed ID: 34965938
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RF: a method for filtering short reads with tandem repeats for genome mapping.
    Misawa K
    Genomics; 2013 Jul; 102(1):35-7. PubMed ID: 23542167
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Model of perfect tandem repeat with random pattern and empirical homogeneity testing poly-criteria for latent periodicity revelation in biological sequences.
    Chaley M; Kutyrkin V
    Math Biosci; 2008 Jan; 211(1):186-204. PubMed ID: 18062999
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Medium-sized tandem repeats represent an abundant component of the Drosophila virilis genome.
    Abdurashitov MA; Gonchar DA; Chernukhin VA; Tomilov VN; Tomilova JE; Schostak NG; Zatsepina OG; Zelentsova ES; Evgen'ev MB; Degtyarev SK
    BMC Genomics; 2013 Nov; 14():771. PubMed ID: 24209985
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Detection of Tandem Repeats in DNA Sequences Using Short-Time Ramanujan Fourier Transform.
    Yadav Y; Sharma SN; Shakya DK
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(3):1583-1591. PubMed ID: 33493119
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Repeat or not repeat?--Statistical validation of tandem repeat prediction in genomic sequences.
    Schaper E; Kajava AV; Hauser A; Anisimova M
    Nucleic Acids Res; 2012 Nov; 40(20):10005-17. PubMed ID: 22923522
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Large-scale analysis of tandem repeat variability in the human genome.
    Duitama J; Zablotskaya A; Gemayel R; Jansen A; Belet S; Vermeesch JR; Verstrepen KJ; Froyen G
    Nucleic Acids Res; 2014 May; 42(9):5728-41. PubMed ID: 24682812
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Detection of Highly Divergent Tandem Repeats in the Rice Genome.
    Korotkov EV; Kamionskya AM; Korotkova MA
    Genes (Basel); 2021 Mar; 12(4):. PubMed ID: 33806152
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 7.