BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

139 related articles for article (PubMed ID: 36876969)

  • 21. Data-Independent Acquisition Approach to Proteome: A Case Study and a Spectral Library for Mass Spectrometry-Based Investigation of
    Awasthi K; Kootimole CN; Aravind A; Prasad TSK
    OMICS; 2022 Mar; 26(3):142-150. PubMed ID: 35099291
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Evaluation of Urinary Proteome Library Generation Methods on Data-Independent Acquisition MS Analysis and its Application in Normal Urinary Proteome Analysis.
    Zhao M; Liu X; Sun H; Guo Z; Liu X; Sun W
    Proteomics Clin Appl; 2019 Sep; 13(5):e1800152. PubMed ID: 31017348
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Evaluation of Protein Identification and Quantification by the diaPASEF Method on timsTOF SCP.
    Wang J; Tan H; Fu Y; Mishra A; Sun H; Wang Z; Wu Z; Wang X; Serrano GE; Beach TG; Peng J; High AA
    J Am Soc Mass Spectrom; 2024 Jun; 35(6):1253-1260. PubMed ID: 38754071
    [TBL] [Abstract][Full Text] [Related]  

  • 24. Generation of HLA Allele-Specific Spectral Libraries to Identify and Quantify Immunopeptidomes by SWATH/DIA-MS.
    Kovalchik K; Hamelin D; Caron E
    Methods Mol Biol; 2022; 2420():137-147. PubMed ID: 34905171
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Computational Optimization of Spectral Library Size Improves DIA-MS Proteome Coverage and Applications to 15 Tumors.
    Ge W; Liang X; Zhang F; Hu Y; Xu L; Xiang N; Sun R; Liu W; Xue Z; Yi X; Sun Y; Wang B; Zhu J; Lu C; Zhan X; Chen L; Wu Y; Zheng Z; Gong W; Wu Q; Yu J; Ye Z; Teng X; Huang S; Zheng S; Liu T; Yuan C; Guo T
    J Proteome Res; 2021 Dec; 20(12):5392-5401. PubMed ID: 34748352
    [TBL] [Abstract][Full Text] [Related]  

  • 26. In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics.
    Yang Y; Liu X; Shen C; Lin Y; Yang P; Qiao L
    Nat Commun; 2020 Jan; 11(1):146. PubMed ID: 31919359
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Characterization of Cerebrospinal Fluid via Data-Independent Acquisition Mass Spectrometry.
    Barkovits K; Linden A; Galozzi S; Schilde L; Pacharra S; Mollenhauer B; Stoepel N; Steinbach S; May C; Uszkoreit J; Eisenacher M; Marcus K
    J Proteome Res; 2018 Oct; 17(10):3418-3430. PubMed ID: 30207155
    [TBL] [Abstract][Full Text] [Related]  

  • 28. diaPASEF: parallel accumulation-serial fragmentation combined with data-independent acquisition.
    Meier F; Brunner AD; Frank M; Ha A; Bludau I; Voytik E; Kaspar-Schoenefeld S; Lubeck M; Raether O; Bache N; Aebersold R; Collins BC; Röst HL; Mann M
    Nat Methods; 2020 Dec; 17(12):1229-1236. PubMed ID: 33257825
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Approaching complete peroxisome characterization by gas-phase fractionation.
    Yi EC; Marelli M; Lee H; Purvine SO; Aebersold R; Aitchison JD; Goodlett DR
    Electrophoresis; 2002 Sep; 23(18):3205-16. PubMed ID: 12298092
    [TBL] [Abstract][Full Text] [Related]  

  • 30. New targeted approaches for the quantification of data-independent acquisition mass spectrometry.
    Bruderer R; Sondermann J; Tsou CC; Barrantes-Freer A; Stadelmann C; Nesvizhskii AI; Schmidt M; Reiter L; Gomez-Varela D
    Proteomics; 2017 May; 17(9):. PubMed ID: 28319648
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Expansion of the ion library for mining SWATH-MS data through fractionation proteomics.
    Zi J; Zhang S; Zhou R; Zhou B; Xu S; Hou G; Tan F; Wen B; Wang Q; Lin L; Liu S
    Anal Chem; 2014 Aug; 86(15):7242-6. PubMed ID: 24969961
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Improving SWATH-MS analysis by deep-learning.
    Sun B; Smialowski P; Aftab W; Schmidt A; Forne I; Straub T; Imhof A
    Proteomics; 2023 May; 23(9):e2200179. PubMed ID: 36571325
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Generation of a zebrafish SWATH-MS spectral library to quantify 10,000 proteins.
    Blattmann P; Stutz V; Lizzo G; Richard J; Gut P; Aebersold R
    Sci Data; 2019 Feb; 6():190011. PubMed ID: 30747917
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Improvements in Mass Spectrometry Assay Library Generation for Targeted Proteomics.
    Teleman J; Hauri S; Malmström J
    J Proteome Res; 2017 Jul; 16(7):2384-2392. PubMed ID: 28516777
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Spectral Libraries for SWATH-MS Assays for Drosophila melanogaster and Solanum lycopersicum.
    Fabre B; Korona D; Mata CI; Parsons HT; Deery MJ; Hertog MLATM; Nicolaï BM; Russell S; Lilley KS
    Proteomics; 2017 Nov; 17(21):. PubMed ID: 28922568
    [TBL] [Abstract][Full Text] [Related]  

  • 36. DIA-Based Proteome Profiling of Nasopharyngeal Swabs from COVID-19 Patients.
    Mun DG; Vanderboom PM; Madugundu AK; Garapati K; Chavan S; Peterson JA; Saraswat M; Pandey A
    J Proteome Res; 2021 Aug; 20(8):4165-4175. PubMed ID: 34292740
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Comparison of protein and peptide fractionation approaches in protein identification and quantification from Saccharomyces cerevisiae.
    Deng L; Handler DCL; Multari DH; Haynes PA
    J Chromatogr B Analyt Technol Biomed Life Sci; 2021 Jan; 1162():122453. PubMed ID: 33279813
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Carboxylate-Modified Magnetic Bead (CMMB)-Based Isopropanol Gradient Peptide Fractionation (CIF) Enables Rapid and Robust Off-Line Peptide Mixture Fractionation in Bottom-Up Proteomics.
    Deng W; Sha J; Plath K; Wohlschlegel JA
    Mol Cell Proteomics; 2021; 20():100039. PubMed ID: 33476790
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Four-dimensional proteomics analysis of human cerebrospinal fluid with trapped ion mobility spectrometry using PASEF.
    Mun DG; Budhraja R; Bhat FA; Zenka RM; Johnson KL; Moghekar A; Pandey A
    Proteomics; 2023 May; 23(10):e2200507. PubMed ID: 36752121
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Human follicular fluid proteomic and peptidomic composition quantitative studies by SWATH-MS methodology. Applicability of high pH RP-HPLC fractionation.
    Lewandowska AE; Macur K; Czaplewska P; Liss J; Łukaszuk K; Ołdziej S
    J Proteomics; 2019 Jan; 191():131-142. PubMed ID: 29530678
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 7.