BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

151 related articles for article (PubMed ID: 36879825)

  • 1. Integration of deep learning with Ramachandran plot molecular dynamics simulation for genetic variant classification.
    Tam B; Qin Z; Zhao B; Wang SM; Lei CL
    iScience; 2023 Mar; 26(3):106122. PubMed ID: 36879825
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Classification of MLH1 Missense VUS Using Protein Structure-Based Deep Learning-Ramachandran Plot-Molecular Dynamics Simulations Method.
    Tam B; Qin Z; Zhao B; Sinha S; Lei CL; Wang SM
    Int J Mol Sci; 2024 Jan; 25(2):. PubMed ID: 38255924
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Combining Ramachandran plot and molecular dynamics simulation for structural-based variant classification: Using
    Tam B; Sinha S; Wang SM
    Comput Struct Biotechnol J; 2020; 18():4033-4039. PubMed ID: 33363700
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Machine learning random forest for predicting oncosomatic variant NGS analysis.
    Pellegrino E; Jacques C; Beaufils N; Nanni I; Carlioz A; Metellus P; Ouafik L
    Sci Rep; 2021 Nov; 11(1):21820. PubMed ID: 34750410
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Variants of DNA mismatch repair genes derived from 33,998 Chinese individuals with and without cancer reveal their highly ethnic-specific nature.
    Zhang L; Bhaskaran SP; Huang T; Dong H; Chandratre K; Wu X; Qin Z; Wang X; Cao W; Chen T; Lynch H; Wang SM
    Eur J Cancer; 2020 Jan; 125():12-21. PubMed ID: 31830689
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Deep Molecular and In Silico Protein Analysis of p53 Alteration in Myelodysplastic Neoplasia and Acute Myeloid Leukemia.
    Madarász K; Mótyán JA; Bedekovics J; Miltényi Z; Ujfalusi A; Méhes G; Mokánszki A
    Cells; 2022 Nov; 11(21):. PubMed ID: 36359870
    [TBL] [Abstract][Full Text] [Related]  

  • 7. A deep learning approach for filtering structural variants in short read sequencing data.
    Liu Y; Huang Y; Wang G; Wang Y
    Brief Bioinform; 2021 Jul; 22(4):. PubMed ID: 33378767
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Convolutional neural network analysis of recurrence plots for high resolution melting classification.
    Ozkok FO; Celik M
    Comput Methods Programs Biomed; 2021 Aug; 207():106139. PubMed ID: 34029831
    [TBL] [Abstract][Full Text] [Related]  

  • 9. A deep learning method for lincRNA detection using auto-encoder algorithm.
    Yu N; Yu Z; Pan Y
    BMC Bioinformatics; 2017 Dec; 18(Suppl 15):511. PubMed ID: 29244011
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Methylation Tolerance-Based Functional Assay to Assess Variants of Unknown Significance in the MLH1 and MSH2 Genes and Identify Patients With Lynch Syndrome.
    Bouvet D; Bodo S; Munier A; Guillerm E; Bertrand R; Colas C; Duval A; Coulet F; Muleris M
    Gastroenterology; 2019 Aug; 157(2):421-431. PubMed ID: 30998989
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Assessing concordance among human, in silico predictions and functional assays on genetic variant classification.
    Luo J; Zhou T; You X; Zi Y; Li X; Wu Y; Lan Z; Zhi Q; Yi D; Xu L; Li A; Zhong Z; Zhu M; Sun G; Zhu T; Rao J; Lin L; Sang J; Shi Y
    Bioinformatics; 2019 Dec; 35(24):5163-5170. PubMed ID: 31141141
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Recurrence Plot-Based Approach for Cardiac Arrhythmia Classification Using Inception-ResNet-v2.
    Zhang H; Liu C; Zhang Z; Xing Y; Liu X; Dong R; He Y; Xia L; Liu F
    Front Physiol; 2021; 12():648950. PubMed ID: 34079470
    [TBL] [Abstract][Full Text] [Related]  

  • 13. The Dawn of next generation DNA sequencing in myelodysplastic syndromes- experience from Pakistan.
    Anwar N; Memon FA; Shahid S; Shakeel M; Irfan M; Arshad A; Naz A; Ujjan ID; Shamsi T
    BMC Genomics; 2021 Dec; 22(1):903. PubMed ID: 34915860
    [TBL] [Abstract][Full Text] [Related]  

  • 14. SNooPer: a machine learning-based method for somatic variant identification from low-pass next-generation sequencing.
    Spinella JF; Mehanna P; Vidal R; Saillour V; Cassart P; Richer C; Ouimet M; Healy J; Sinnett D
    BMC Genomics; 2016 Nov; 17(1):912. PubMed ID: 27842494
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Identification of deleterious variants of uncertain significance in BRCA2 BRC4 repeat through molecular dynamics simulations.
    Sinha S; Qin Z; Tam B; Wang SM
    Brief Funct Genomics; 2022 May; 21(3):202-215. PubMed ID: 35325018
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Automatic classification of nerve discharge rhythms based on sparse auto-encoder and time series feature.
    Jiang Z; Wang D; Chen Y
    BMC Bioinformatics; 2022 Feb; 22(Suppl 3):619. PubMed ID: 35168551
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Deep learning models for bacteria taxonomic classification of metagenomic data.
    Fiannaca A; La Paglia L; La Rosa M; Lo Bosco G; Renda G; Rizzo R; Gaglio S; Urso A
    BMC Bioinformatics; 2018 Jul; 19(Suppl 7):198. PubMed ID: 30066629
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A deep learning- and partial least square regression-based model observer for a low-contrast lesion detection task in CT.
    Gong H; Yu L; Leng S; Dilger SK; Ren L; Zhou W; Fletcher JG; McCollough CH
    Med Phys; 2019 May; 46(5):2052-2063. PubMed ID: 30889282
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Detection of chromosome structural variation by targeted next-generation sequencing and a deep learning application.
    Park H; Chun SM; Shim J; Oh JH; Cho EJ; Hwang HS; Lee JY; Kim D; Jang SJ; Nam SJ; Hwang C; Sohn I; Sung CO
    Sci Rep; 2019 Mar; 9(1):3644. PubMed ID: 30842562
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 8.