BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

201 related articles for article (PubMed ID: 36897885)

  • 1. G4mismatch: Deep neural networks to predict G-quadruplex propensity based on G4-seq data.
    Barshai M; Engel B; Haim I; Orenstein Y
    PLoS Comput Biol; 2023 Mar; 19(3):e1010948. PubMed ID: 36897885
    [TBL] [Abstract][Full Text] [Related]  

  • 2. G4detector: Convolutional Neural Network to Predict DNA G-Quadruplexes.
    Barshai M; Aubert A; Orenstein Y
    IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(4):1946-1955. PubMed ID: 33872156
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Re-evaluation of G-quadruplex propensity with G4Hunter.
    Bedrat A; Lacroix L; Mergny JL
    Nucleic Acids Res; 2016 Feb; 44(4):1746-59. PubMed ID: 26792894
    [TBL] [Abstract][Full Text] [Related]  

  • 4. An overview on nucleic-acid G-quadruplex prediction: from rule-based methods to deep neural networks.
    Elimelech-Zohar K; Orenstein Y
    Brief Bioinform; 2023 Jul; 24(4):. PubMed ID: 37438149
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Using hidden Markov models to investigate G-quadruplex motifs in genomic sequences.
    Yano M; Kato Y
    BMC Genomics; 2014; 15 Suppl 9(Suppl 9):S15. PubMed ID: 25521044
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Machine learning model for sequence-driven DNA G-quadruplex formation.
    Sahakyan AB; Chambers VS; Marsico G; Santner T; Di Antonio M; Balasubramanian S
    Sci Rep; 2017 Nov; 7(1):14535. PubMed ID: 29109402
    [TBL] [Abstract][Full Text] [Related]  

  • 7. G-Quadruplexes Involving Both Strands of Genomic DNA Are Highly Abundant and Colocalize with Functional Sites in the Human Genome.
    Kudlicki AS
    PLoS One; 2016; 11(1):e0146174. PubMed ID: 26727593
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genomic landscape, polymorphism and possible LINE-associated delivery of G-quadruplex motifs in the bovine genes.
    Stefos GC; Theodorou G; Politis I
    Genomics; 2022 Mar; 114(2):110272. PubMed ID: 35092818
    [TBL] [Abstract][Full Text] [Related]  

  • 9. DeepG4: A deep learning approach to predict cell-type specific active G-quadruplex regions.
    Rocher V; Genais M; Nassereddine E; Mourad R
    PLoS Comput Biol; 2021 Aug; 17(8):e1009308. PubMed ID: 34383754
    [TBL] [Abstract][Full Text] [Related]  

  • 10. G-quadruplex DNA: A Longer Story.
    Monsen RC; Trent JO; Chaires JB
    Acc Chem Res; 2022 Nov; 55(22):3242-3252. PubMed ID: 36282946
    [TBL] [Abstract][Full Text] [Related]  

  • 11. G-quadruplex nucleic acids and human disease.
    Wu Y; Brosh RM
    FEBS J; 2010 Sep; 277(17):3470-88. PubMed ID: 20670277
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The 3'-end region of the human PDGFR-β core promoter nuclease hypersensitive element forms a mixture of two unique end-insertion G-quadruplexes.
    Onel B; Carver M; Agrawal P; Hurley LH; Yang D
    Biochim Biophys Acta Gen Subj; 2018 Apr; 1862(4):846-854. PubMed ID: 29288770
    [TBL] [Abstract][Full Text] [Related]  

  • 13. High-throughput sequencing of DNA G-quadruplex structures in the human genome.
    Chambers VS; Marsico G; Boutell JM; Di Antonio M; Smith GP; Balasubramanian S
    Nat Biotechnol; 2015 Aug; 33(8):877-81. PubMed ID: 26192317
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TTS mapping: integrative WEB tool for analysis of triplex formation target DNA sequences, G-quadruplets and non-protein coding regulatory DNA elements in the human genome.
    Jenjaroenpun P; Kuznetsov VA
    BMC Genomics; 2009 Dec; 10 Suppl 3(Suppl 3):S9. PubMed ID: 19958507
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Genomic distribution and polymorphism of G-quadruplex motifs occupying ovine promoters and enhancers.
    Stefos GC; Theodorou G; Politis I
    Mamm Genome; 2023 Sep; 34(3):473-481. PubMed ID: 36964238
    [TBL] [Abstract][Full Text] [Related]  

  • 16. In Vivo Chemical Probing for G-Quadruplex Formation.
    Kouzine F; Wojtowicz D; Yamane A; Casellas R; Przytycka TM; Levens DL
    Methods Mol Biol; 2019; 2035():369-382. PubMed ID: 31444763
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A guide to computational methods for G-quadruplex prediction.
    Puig Lombardi E; Londoño-Vallejo A
    Nucleic Acids Res; 2020 Jan; 48(1):1-15. PubMed ID: 31754698
    [TBL] [Abstract][Full Text] [Related]  

  • 18. G-quadruplex structures are stable and detectable in human genomic DNA.
    Lam EY; Beraldi D; Tannahill D; Balasubramanian S
    Nat Commun; 2013; 4():1796. PubMed ID: 23653208
    [TBL] [Abstract][Full Text] [Related]  

  • 19. G-Quadruplexes in the Archaea Domain.
    Brázda V; Luo Y; Bartas M; Kaura P; Porubiaková O; Šťastný J; Pečinka P; Verga D; Da Cunha V; Takahashi TS; Forterre P; Myllykallio H; Fojta M; Mergny JL
    Biomolecules; 2020 Sep; 10(9):. PubMed ID: 32967357
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Direct genome-wide identification of G-quadruplex structures by whole-genome resequencing.
    Tu J; Duan M; Liu W; Lu N; Zhou Y; Sun X; Lu Z
    Nat Commun; 2021 Oct; 12(1):6014. PubMed ID: 34650044
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.