These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

172 related articles for article (PubMed ID: 36906688)

  • 1. Mock community as an in situ positive control for amplicon sequencing of microbiotas from the same ecosystem.
    Galla G; Praeg N; Colla F; Rzehak T; Illmer P; Seeber J; Hauffe HC
    Sci Rep; 2023 Mar; 13(1):4056. PubMed ID: 36906688
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Comparison of DNA extraction methods on different sample matrices within the same terrestrial ecosystem.
    Galla G; Praeg N; Rzehak T; Sprecher E; Colla F; Seeber J; Illmer P; Hauffe HC
    Sci Rep; 2024 Apr; 14(1):8715. PubMed ID: 38622248
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Refinement of 16S rRNA gene analysis for low biomass biospecimens.
    Villette R; Autaa G; Hind S; Holm JB; Moreno-Sabater A; Larsen M
    Sci Rep; 2021 May; 11(1):10741. PubMed ID: 34031485
    [TBL] [Abstract][Full Text] [Related]  

  • 4. rpoB, a promising marker for analyzing the diversity of bacterial communities by amplicon sequencing.
    Ogier JC; Pagès S; Galan M; Barret M; Gaudriault S
    BMC Microbiol; 2019 Jul; 19(1):171. PubMed ID: 31357928
    [TBL] [Abstract][Full Text] [Related]  

  • 5. High-quality single amplicon sequencing method for illumina MiSeq platform using pool of 'N' (0-10) spacer-linked target specific primers without PhiX spike-in.
    Naik T; Sharda M; C P L; Virbhadra K; Pandit A
    BMC Genomics; 2023 Mar; 24(1):141. PubMed ID: 36959538
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Comparison of Oxford Nanopore Technologies and Illumina MiSeq sequencing with mock communities and agricultural soil.
    Stevens BM; Creed TB; Reardon CL; Manter DK
    Sci Rep; 2023 Jun; 13(1):9323. PubMed ID: 37291169
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comparative evaluation of analytical pipelines for illumina short- and nanopore long-read 16S rRNA gene amplicon sequencing with mock microbial communities.
    Ota Y; Yasunaga K; Mahazu S; Prah I; Nagai S; Hayashi T; Suzuki M; Yoshida M; Hoshino Y; Akeda Y; Suzuki T; Gu Y; Saito R
    J Microbiol Methods; 2024 Jun; 221():106929. PubMed ID: 38599390
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A novel ultra high-throughput 16S rRNA gene amplicon sequencing library preparation method for the Illumina HiSeq platform.
    de Muinck EJ; Trosvik P; Gilfillan GD; Hov JR; Sundaram AYM
    Microbiome; 2017 Jul; 5(1):68. PubMed ID: 28683838
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Bovine Milk Microbiota: Comparison among Three Different DNA Extraction Protocols To Identify a Better Approach for Bacterial Analysis.
    Cremonesi P; Severgnini M; Romanò A; Sala L; Luini M; Castiglioni B
    Microbiol Spectr; 2021 Oct; 9(2):e0037421. PubMed ID: 34550002
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Managing Contamination and Diverse Bacterial Loads in 16S rRNA Deep Sequencing of Clinical Samples: Implications of the Law of Small Numbers.
    Dyrhovden R; Rippin M; Øvrebø KK; Nygaard RM; Ulvestad E; Kommedal Ø
    mBio; 2021 Jun; 12(3):e0059821. PubMed ID: 34101489
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies.
    Brooks JP; Edwards DJ; Harwich MD; Rivera MC; Fettweis JM; Serrano MG; Reris RA; Sheth NU; Huang B; Girerd P; ; Strauss JF; Jefferson KK; Buck GA
    BMC Microbiol; 2015 Mar; 15():66. PubMed ID: 25880246
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Deciphering intra-species bacterial diversity of meat and seafood spoilage microbiota using gyrB amplicon sequencing: A comparative analysis with 16S rDNA V3-V4 amplicon sequencing.
    Poirier S; Rué O; Peguilhan R; Coeuret G; Zagorec M; Champomier-Vergès MC; Loux V; Chaillou S
    PLoS One; 2018; 13(9):e0204629. PubMed ID: 30252901
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Characterization and Demonstration of Mock Communities as Control Reagents for Accurate Human Microbiome Community Measurements.
    Tourlousse DM; Narita K; Miura T; Ohashi A; Matsuda M; Ohyama Y; Shimamura M; Furukawa M; Kasahara K; Kameyama K; Saito S; Goto M; Shimizu R; Mishima R; Nakayama J; Hosomi K; Kunisawa J; Terauchi J; Sekiguchi Y; Kawasaki H
    Microbiol Spectr; 2022 Apr; 10(2):e0191521. PubMed ID: 35234490
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Evaluation of 16S rRNA amplicon sequencing using two next-generation sequencing technologies for phylogenetic analysis of the rumen bacterial community in steers.
    Myer PR; Kim M; Freetly HC; Smith TPL
    J Microbiol Methods; 2016 Aug; 127():132-140. PubMed ID: 27282101
    [TBL] [Abstract][Full Text] [Related]  

  • 15. MinION™ nanopore sequencing of environmental metagenomes: a synthetic approach.
    Brown BL; Watson M; Minot SS; Rivera MC; Franklin RB
    Gigascience; 2017 Mar; 6(3):1-10. PubMed ID: 28327976
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Combined bacterial and fungal targeted amplicon sequencing of respiratory samples: Does the DNA extraction method matter?
    Angebault C; Payen M; Woerther PL; Rodriguez C; Botterel F
    PLoS One; 2020; 15(4):e0232215. PubMed ID: 32343737
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Do-it-Yourself Mock Community Standard for Multi-Step Assessment of Microbiome Protocols.
    Colovas J; Bintarti AF; Mechan Llontop ME; Grady KL; Shade A
    Curr Protoc; 2022 Sep; 2(9):e533. PubMed ID: 36066286
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Species classifier choice is a key consideration when analysing low-complexity food microbiome data.
    Walsh AM; Crispie F; O'Sullivan O; Finnegan L; Claesson MJ; Cotter PD
    Microbiome; 2018 Mar; 6(1):50. PubMed ID: 29554948
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform.
    Castelino M; Eyre S; Moat J; Fox G; Martin P; Ho P; Upton M; Barton A
    BMC Microbiol; 2017 Jan; 17(1):23. PubMed ID: 28109256
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
    Abellan-Schneyder I; Matchado MS; Reitmeier S; Sommer A; Sewald Z; Baumbach J; List M; Neuhaus K
    mSphere; 2021 Feb; 6(1):. PubMed ID: 33627512
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.