These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

209 related articles for article (PubMed ID: 36928528)

  • 1. The spatial landscape of gene expression isoforms in tissue sections.
    Lebrigand K; Bergenstråhle J; Thrane K; Mollbrink A; Meletis K; Barbry P; Waldmann R; Lundeberg J
    Nucleic Acids Res; 2023 May; 51(8):e47. PubMed ID: 36928528
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Full-length transcript sequencing of human and mouse cerebral cortex identifies widespread isoform diversity and alternative splicing.
    Leung SK; Jeffries AR; Castanho I; Jordan BT; Moore K; Davies JP; Dempster EL; Bray NJ; O'Neill P; Tseng E; Ahmed Z; Collier DA; Jeffery ED; Prabhakar S; Schalkwyk L; Jops C; Gandal MJ; Sheynkman GM; Hannon E; Mill J
    Cell Rep; 2021 Nov; 37(7):110022. PubMed ID: 34788620
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Comprehensive characterization of single-cell full-length isoforms in human and mouse with long-read sequencing.
    Tian L; Jabbari JS; Thijssen R; Gouil Q; Amarasinghe SL; Voogd O; Kariyawasam H; Du MRM; Schuster J; Wang C; Su S; Dong X; Law CW; Lucattini A; Prawer YDJ; Collar-Fernández C; Chung JD; Naim T; Chan A; Ly CH; Lynch GS; Ryall JG; Anttila CJA; Peng H; Anderson MA; Flensburg C; Majewski I; Roberts AW; Huang DCS; Clark MB; Ritchie ME
    Genome Biol; 2021 Nov; 22(1):310. PubMed ID: 34763716
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Transcript Profiling Using Long-Read Sequencing Technologies.
    Bayega A; Wang YC; Oikonomopoulos S; Djambazian H; Fahiminiya S; Ragoussis J
    Methods Mol Biol; 2018; 1783():121-147. PubMed ID: 29767360
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Deep Sequencing Reveals Uncharted Isoform Heterogeneity of the Protein-Coding Transcriptome in Cerebral Ischemia.
    Bhattarai S; Aly A; Garcia K; Ruiz D; Pontarelli F; Dharap A
    Mol Neurobiol; 2019 Feb; 56(2):1035-1043. PubMed ID: 29862458
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Developmental isoform diversity in the human neocortex informs neuropsychiatric risk mechanisms.
    Patowary A; Zhang P; Jops C; Vuong CK; Ge X; Hou K; Kim M; Gong N; Margolis M; Vo D; Wang X; Liu C; Pasaniuc B; Li JJ; Gandal MJ; de la Torre-Ubieta L
    bioRxiv; 2023 Oct; ():. PubMed ID: 36993726
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Robust detection of alternative splicing in a population of single cells.
    Welch JD; Hu Y; Prins JF
    Nucleic Acids Res; 2016 May; 44(8):e73. PubMed ID: 26740580
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Freddie: annotation-independent detection and discovery of transcriptomic alternative splicing isoforms using long-read sequencing.
    Orabi B; Xie N; McConeghy B; Dong X; Chauve C; Hach F
    Nucleic Acids Res; 2023 Jan; 51(2):e11. PubMed ID: 36478271
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improving RNA-Seq expression estimation by modeling isoform- and exon-specific read sequencing rate.
    Liu X; Shi X; Chen C; Zhang L
    BMC Bioinformatics; 2015 Oct; 16():332. PubMed ID: 26475308
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Pacific Biosciences Fusion and Long Isoform Pipeline for Cancer Transcriptome-Based Resolution of Isoform Complexity.
    Miller AR; Wijeratne S; McGrath SD; Schieffer KM; Miller KE; Lee K; Mathew M; LaHaye S; Fitch JR; Kelly BJ; White P; Mardis ER; Wilson RK; Cottrell CE; Magrini V
    J Mol Diagn; 2022 Dec; 24(12):1292-1306. PubMed ID: 36191838
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Transcript Identification Through Long-Read Sequencing.
    Seki M; Oka M; Xu L; Suzuki A; Suzuki Y
    Methods Mol Biol; 2021; 2284():531-541. PubMed ID: 33835462
    [TBL] [Abstract][Full Text] [Related]  

  • 12. From words to complete phrases: insight into single-cell isoforms using short and long reads.
    Joglekar A; Foord C; Jarroux J; Pollard S; Tilgner HU
    Transcription; 2023; 14(3-5):92-104. PubMed ID: 37314295
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Isoform Age - Splice Isoform Profiling Using Long-Read Technologies.
    De Paoli-Iseppi R; Gleeson J; Clark MB
    Front Mol Biosci; 2021; 8():711733. PubMed ID: 34409069
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Long-read RNA sequencing identifies region- and sex-specific C57BL/6J mouse brain mRNA isoform expression and usage.
    Jones EF; Howton TC; Flanary VL; Clark AD; Lasseigne BN
    Mol Brain; 2024 Jun; 17(1):40. PubMed ID: 38902764
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Microfluidic isoform sequencing shows widespread splicing coordination in the human transcriptome.
    Tilgner H; Jahanbani F; Gupta I; Collier P; Wei E; Rasmussen M; Snyder M
    Genome Res; 2018 Feb; 28(2):231-242. PubMed ID: 29196558
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Splice Expression Variation Analysis (SEVA) for inter-tumor heterogeneity of gene isoform usage in cancer.
    Afsari B; Guo T; Considine M; Florea L; Kagohara LT; Stein-O'Brien GL; Kelley D; Flam E; Zambo KD; Ha PK; Geman D; Ochs MF; Califano JA; Gaykalova DA; Favorov AV; Fertig EJ
    Bioinformatics; 2018 Jun; 34(11):1859-1867. PubMed ID: 29342249
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Blind spots of quantitative RNA-seq: the limits for assessing abundance, differential expression, and isoform switching.
    Rehrauer H; Opitz L; Tan G; Sieverling L; Schlapbach R
    BMC Bioinformatics; 2013 Dec; 14():370. PubMed ID: 24365034
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Exploring differential exon usage via short- and long-read RNA sequencing strategies.
    Leshkowitz D; Kedmi M; Fried Y; Pilzer D; Keren-Shaul H; Ainbinder E; Dassa B
    Open Biol; 2022 Sep; 12(9):220206. PubMed ID: 36168804
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Identification of Protein Isoforms Using Reference Databases Built from Long and Short Read RNA-Sequencing.
    Tay AP; Hamey JJ; Martyn GE; Wilson LOW; Wilkins MR
    J Proteome Res; 2022 Jul; 21(7):1628-1639. PubMed ID: 35612954
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Long-read transcriptome sequencing reveals abundant promoter diversity in distinct molecular subtypes of gastric cancer.
    Huang KK; Huang J; Wu JKL; Lee M; Tay ST; Kumar V; Ramnarayanan K; Padmanabhan N; Xu C; Tan ALK; Chan C; Kappei D; Göke J; Tan P
    Genome Biol; 2021 Jan; 22(1):44. PubMed ID: 33482911
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.