203 related articles for article (PubMed ID: 36929078)
1. Statistical Analysis in ChIP-seq-Related Applications.
Teng M
Methods Mol Biol; 2023; 2629():169-181. PubMed ID: 36929078
[TBL] [Abstract][Full Text] [Related]
2. Bioinformatics Methods for ChIP-seq Histone Analysis.
Servant N
Methods Mol Biol; 2022; 2529():267-293. PubMed ID: 35733020
[TBL] [Abstract][Full Text] [Related]
3. Software for rapid time dependent ChIP-sequencing analysis (TDCA).
Myschyshyn M; Farren-Dai M; Chuang TJ; Vocadlo D
BMC Bioinformatics; 2017 Nov; 18(1):521. PubMed ID: 29178831
[TBL] [Abstract][Full Text] [Related]
4. Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-Seq): Tips and Tricks Regarding the Laboratory Protocol and Initial Downstream Data Analysis.
Patten DK; Corleone G; Magnani L
Methods Mol Biol; 2018; 1767():271-288. PubMed ID: 29524141
[TBL] [Abstract][Full Text] [Related]
5. Quantitative Comparison of Multiple Chromatin Immunoprecipitation-Sequencing (ChIP-seq) Experiments with spikChIP.
Blanco E; Ballaré C; Di Croce L; Aranda S
Methods Mol Biol; 2023; 2624():55-72. PubMed ID: 36723809
[TBL] [Abstract][Full Text] [Related]
6. Discovering CsgD Regulatory Targets in Salmonella Biofilm Using Chromatin Immunoprecipitation and High-Throughput Sequencing (ChIP-seq).
Palmer MB; Wang Y; White AP
J Vis Exp; 2020 Jan; (155):. PubMed ID: 32009660
[TBL] [Abstract][Full Text] [Related]
7. Chromatin Immunoprecipitation Sequencing (ChIP-seq) for Detecting Histone Modifications and Modifiers.
Hino S; Sato T; Nakao M
Methods Mol Biol; 2023; 2577():55-64. PubMed ID: 36173565
[TBL] [Abstract][Full Text] [Related]
8. HiChIP: a high-throughput pipeline for integrative analysis of ChIP-Seq data.
Yan H; Evans J; Kalmbach M; Moore R; Middha S; Luban S; Wang L; Bhagwate A; Li Y; Sun Z; Chen X; Kocher JP
BMC Bioinformatics; 2014 Aug; 15(1):280. PubMed ID: 25128017
[TBL] [Abstract][Full Text] [Related]
9. ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline.
Qin Q; Mei S; Wu Q; Sun H; Li L; Taing L; Chen S; Li F; Liu T; Zang C; Xu H; Chen Y; Meyer CA; Zhang Y; Brown M; Long HW; Liu XS
BMC Bioinformatics; 2016 Oct; 17(1):404. PubMed ID: 27716038
[TBL] [Abstract][Full Text] [Related]
10. Genome-Wide Identification of Transcription Factor-Binding Sites in Quiescent Adult Neural Stem Cells.
Mukherjee S; Hsieh J
Methods Mol Biol; 2018; 1686():265-286. PubMed ID: 29030827
[TBL] [Abstract][Full Text] [Related]
11. Protocol to apply spike-in ChIP-seq to capture massive histone acetylation in human cells.
Wu D; Wang L; Huang H
STAR Protoc; 2021 Sep; 2(3):100681. PubMed ID: 34337446
[TBL] [Abstract][Full Text] [Related]
12. Effects of sheared chromatin length on ChIP-seq quality and sensitivity.
Keller CA; Wixom AQ; Heuston EF; Giardine B; Hsiung CC; Long MR; Miller A; Anderson SM; Cockburn A; Blobel GA; Bodine DM; Hardison RC
G3 (Bethesda); 2021 Jun; 11(6):. PubMed ID: 33788948
[TBL] [Abstract][Full Text] [Related]
13. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input.
Handa T; Harada A; Maehara K; Sato S; Nakao M; Goto N; Kurumizaka H; Ohkawa Y; Kimura H
Nat Protoc; 2020 Oct; 15(10):3334-3360. PubMed ID: 32807906
[TBL] [Abstract][Full Text] [Related]
14. Genome-wide profiling of transcription factor binding and epigenetic marks in adipocytes by ChIP-seq.
Nielsen R; Mandrup S
Methods Enzymol; 2014; 537():261-79. PubMed ID: 24480351
[TBL] [Abstract][Full Text] [Related]
15. Modelling ChIP-seq Data Using HMMs.
Vinciotti V
Methods Mol Biol; 2017; 1552():115-122. PubMed ID: 28224494
[TBL] [Abstract][Full Text] [Related]
16. ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sites.
Lefrançois P; Zheng W; Snyder M
Methods Enzymol; 2010; 470():77-104. PubMed ID: 20946807
[TBL] [Abstract][Full Text] [Related]
17. Global analysis of transcription factor-binding sites in yeast using ChIP-Seq.
Lefrançois P; Gallagher JE; Snyder M
Methods Mol Biol; 2014; 1205():231-55. PubMed ID: 25213249
[TBL] [Abstract][Full Text] [Related]
18. Chromatin Immunoprecipitation Sequencing (ChIP-seq) Protocol for Small Amounts of Frozen Biobanked Cardiac Tissue.
Pei J; van den Dungen NAM; Asselbergs FW; Mokry M; Harakalova M
Methods Mol Biol; 2022; 2458():97-111. PubMed ID: 35103964
[TBL] [Abstract][Full Text] [Related]
19. Data exploration, quality control and statistical analysis of ChIP-exo/nexus experiments.
Welch R; Chung D; Grass J; Landick R; Keles S
Nucleic Acids Res; 2017 Sep; 45(15):e145. PubMed ID: 28911122
[TBL] [Abstract][Full Text] [Related]
20. Native internally calibrated chromatin immunoprecipitation for quantitative studies of histone post-translational modifications.
Grzybowski AT; Shah RN; Richter WF; Ruthenburg AJ
Nat Protoc; 2019 Dec; 14(12):3275-3302. PubMed ID: 31723301
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]