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7. Differential Analysis of Protein-DNA Binding Using ChIP-Seq Data. Boeckel C; Pastor X; Heinig M; Walzthoeni T Methods Mol Biol; 2024; 2846():63-89. PubMed ID: 39141230 [TBL] [Abstract][Full Text] [Related]
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14. Effects of sheared chromatin length on ChIP-seq quality and sensitivity. Keller CA; Wixom AQ; Heuston EF; Giardine B; Hsiung CC; Long MR; Miller A; Anderson SM; Cockburn A; Blobel GA; Bodine DM; Hardison RC G3 (Bethesda); 2021 Jun; 11(6):. PubMed ID: 33788948 [TBL] [Abstract][Full Text] [Related]
15. Chromatin integration labeling for mapping DNA-binding proteins and modifications with low input. Handa T; Harada A; Maehara K; Sato S; Nakao M; Goto N; Kurumizaka H; Ohkawa Y; Kimura H Nat Protoc; 2020 Oct; 15(10):3334-3360. PubMed ID: 32807906 [TBL] [Abstract][Full Text] [Related]
16. Genome-wide profiling of transcription factor binding and epigenetic marks in adipocytes by ChIP-seq. Nielsen R; Mandrup S Methods Enzymol; 2014; 537():261-79. PubMed ID: 24480351 [TBL] [Abstract][Full Text] [Related]
17. Modelling ChIP-seq Data Using HMMs. Vinciotti V Methods Mol Biol; 2017; 1552():115-122. PubMed ID: 28224494 [TBL] [Abstract][Full Text] [Related]
18. ChIP-Seq using high-throughput DNA sequencing for genome-wide identification of transcription factor binding sites. Lefrançois P; Zheng W; Snyder M Methods Enzymol; 2010; 470():77-104. PubMed ID: 20946807 [TBL] [Abstract][Full Text] [Related]
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